RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-208	ENST00000477447	PPP1R8	Q12972	351 aa	Known RBP	2.58	□□□□□ -2
TARDBP-208	ENST00000477447	PEX6	Q13608	980 aa		2.58	□□□□□ -2
TARDBP-208	ENST00000477447	ABRAXAS2	Q15018	415 aa		2.58	□□□□□ -2
TARDBP-208	ENST00000477447	HFE	Q30201	348 aa		2.58	□□□□□ -2
TARDBP-208	ENST00000477447	CNPY1	Q3B7I2	92 aa		2.58	□□□□□ -2
TARDBP-208	ENST00000477447	KRT71	Q3SY84	523 aa		2.58	□□□□□ -2
TARDBP-208	ENST00000477447	C14orf28	Q4W4Y0	310 aa		2.58	□□□□□ -2
TARDBP-208	ENST00000477447	ACER2	Q5QJU3	275 aa		2.58	□□□□□ -2
TARDBP-208	ENST00000477447	ASRGL1	Q7L266	308 aa		2.58	□□□□□ -2
TARDBP-208	ENST00000477447	HIPK1	Q86Z02	1210 aa		2.58	□□□□□ -2
TARDBP-208	ENST00000477447	CNTN4	Q8IWV2	1026 aa		2.58	□□□□□ -2
TARDBP-208	ENST00000477447	LINC00518	Q8N0U6	118 aa		2.58	□□□□□ -2
TARDBP-208	ENST00000477447	ZNF713	Q8N859	430 aa	Predicted RBP	2.58	□□□□□ -2
TARDBP-208	ENST00000477447	BEST4	Q8NFU0	473 aa		2.58	□□□□□ -2
TARDBP-208	ENST00000477447	FLVCR1-AS1	Q8TAF5	88 aa		2.58	□□□□□ -2
TARDBP-208	ENST00000477447	AGAP11	Q8TF27	550 aa		2.58	□□□□□ -2
TARDBP-208	ENST00000477447	EEF2KMT	Q96G04	330 aa		2.58	□□□□□ -2
TARDBP-208	ENST00000477447	SPATA13	Q96N96	652 aa		2.58	□□□□□ -2
TARDBP-208	ENST00000477447	TMEM245	Q9H330	911 aa		2.58	□□□□□ -2
TARDBP-208	ENST00000477447	KCNMB3	Q9NPA1	279 aa		2.58	□□□□□ -2
TARDBP-208	ENST00000477447	PRMT8	Q9NR22	394 aa	Predicted RBP	2.58	□□□□□ -2
TARDBP-208	ENST00000477447	ZNF446	Q9NWS9	450 aa		2.58	□□□□□ -2
TARDBP-208	ENST00000477447	CLEC5A	Q9NY25	188 aa		2.58	□□□□□ -2
TARDBP-208	ENST00000477447	GPR83	Q9NYM4	423 aa		2.58	□□□□□ -2
TARDBP-208	ENST00000477447	NDUFA13	Q9P0J0	144 aa		2.58	□□□□□ -2
TARDBP-208	ENST00000477447	DHRS4-AS1	Q9P1J3	65 aa		2.58	□□□□□ -2
TARDBP-208	ENST00000477447	VPS54	Q9P1Q0	977 aa		2.58	□□□□□ -2
TARDBP-208	ENST00000477447	SLC6A5	Q9Y345	797 aa		2.58	□□□□□ -2
TARDBP-208	ENST00000477447	KIF7	Q2M1P5	1343 aa		2.58	□□□□□ -2
TARDBP-208	ENST00000477447	GON4L	Q3T8J9	2241 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	TRAV9-2	A0A087WT02	112 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	MACROD2	A1Z1Q3	448 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447		K7ERI5	159 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	VEGFD	O43915	354 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	KERA	O60938	352 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	ZNF253	O75346	499 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	KBTBD11	O94819	623 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	PDGFB	P01127	241 aa	Predicted RBP	2.57	□□□□□ -2
TARDBP-208	ENST00000477447	ZNF18	P17022	549 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	UCP1	P25874	307 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	MARCKS	P29966	332 aa	Predicted RBP	2.57	□□□□□ -2
TARDBP-208	ENST00000477447	HMGCL	P35914	325 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	TRIM23	P36406	574 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	BRCC3	P46736	316 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	NDST1	P52848	882 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	IST1	P53990	364 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	TSTA3	Q13630	321 aa	Predicted RBP	2.57	□□□□□ -2
TARDBP-208	ENST00000477447	ANKRD55	Q3KP44	614 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	SLC22A6	Q4U2R8	563 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	TCHHL1	Q5QJ38	904 aa	Predicted RBP	2.57	□□□□□ -2
TARDBP-208	ENST00000477447	RNLS	Q5VYX0	342 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	SERINC5	Q86VE9	423 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	SLC22A16	Q86VW1	577 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	PEX5L	Q8IYB4	626 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	SLCO4A1	Q96BD0	722 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	BIRC7	Q96CA5	298 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	ZNF560	Q96MR9	790 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	GPR137	Q96N19	417 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	PRAM1	Q96QH2	718 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	MCCC1	Q96RQ3	725 aa	Predicted RBP	2.57	□□□□□ -2
TARDBP-208	ENST00000477447	APOL2	Q9BQE5	337 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	TEX13A	Q9BXU3	409 aa	Predicted RBP	2.57	□□□□□ -2
TARDBP-208	ENST00000477447	TRPV6	Q9H1D0	765 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	CARD9	Q9H257	536 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	ADGRL4	Q9HBW9	690 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	SLC7A10	Q9NS82	523 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	ABCC13	Q9NSE7	274 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	CUTC	Q9NTM9	273 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	RCOR3	Q9P2K3	495 aa	Predicted RBP	2.57	□□□□□ -2
TARDBP-208	ENST00000477447	ERVK-18	Q9QC07	812 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	COPS7A	Q9UBW8	275 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	TRMT6	Q9UJA5	497 aa	Known RBP	2.57	□□□□□ -2
TARDBP-208	ENST00000477447	SLC9A8	Q9Y2E8	581 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	TDRKH	Q9Y2W6	561 aa	Known RBP	2.57	□□□□□ -2
TARDBP-208	ENST00000477447	MRPS2	Q9Y399	296 aa	Known RBP	2.57	□□□□□ -2
TARDBP-208	ENST00000477447	ATG4B	Q9Y4P1	393 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	TEX264	Q9Y6I9	313 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	AFF2	P51816	1311 aa		2.57	□□□□□ -2
TARDBP-208	ENST00000477447	CHEK1	O14757	476 aa		2.56	□□□□□ -2
TARDBP-208	ENST00000477447	SYNGR4	O95473	234 aa		2.56	□□□□□ -2
TARDBP-208	ENST00000477447	CXCL14	O95715	111 aa		2.56	□□□□□ -2
TARDBP-208	ENST00000477447	OLFM2	O95897	454 aa		2.56	□□□□□ -2
TARDBP-208	ENST00000477447	FCAR	P24071	287 aa		2.56	□□□□□ -2
TARDBP-208	ENST00000477447	TNFRSF4	P43489	277 aa		2.56	□□□□□ -2
TARDBP-208	ENST00000477447	RPL34	P49207	117 aa	Known RBP	2.56	□□□□□ -2
TARDBP-208	ENST00000477447	NT5C2	P49902	561 aa		2.56	□□□□□ -2
TARDBP-208	ENST00000477447	CSRP3	P50461	194 aa		2.56	□□□□□ -2
TARDBP-208	ENST00000477447	CNN1	P51911	297 aa	Known RBP	2.56	□□□□□ -2
TARDBP-208	ENST00000477447	SLC7A2	P52569	658 aa		2.56	□□□□□ -2
TARDBP-208	ENST00000477447	MFAP2	P55001	183 aa		2.56	□□□□□ -2
TARDBP-208	ENST00000477447	NLRP11	P59045	1033 aa	Known RBP	2.56	□□□□□ -2
TARDBP-208	ENST00000477447	SRP54	P61011	504 aa	Known RBP	2.56	□□□□□ -2
TARDBP-208	ENST00000477447	CCZ1B	P86790	482 aa		2.56	□□□□□ -2
TARDBP-208	ENST00000477447	CCZ1	P86791	482 aa	Predicted RBP	2.56	□□□□□ -2
TARDBP-208	ENST00000477447	AP1B1	Q10567	949 aa		2.56	□□□□□ -2
TARDBP-208	ENST00000477447	PPP2R5C	Q13362	524 aa		2.56	□□□□□ -2
TARDBP-208	ENST00000477447	RUNX3	Q13761	415 aa		2.56	□□□□□ -2
TARDBP-208	ENST00000477447	HAGH	Q16775	308 aa		2.56	□□□□□ -2
TARDBP-208	ENST00000477447	C17orf58	Q2M2W7	97 aa		2.56	□□□□□ -2
TARDBP-208	ENST00000477447	HKDC1	Q2TB90	917 aa		2.56	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms