RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 TMEM88Q6PEY1 159 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 KLHL24Q6TFL4 600 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 CES3Q6UWW8 571 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 TMPRSS11AQ6ZMR5 421 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 ZNF551Q7Z340 670 aaPredicted RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 MOGAT3Q86VF5 341 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 IFNEQ86WN2 208 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 LDLRAD3Q86YD5 345 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 UNC5BQ8IZJ1 945 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 GCNT2Q8N0V5 402 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 ARMC10Q8N2F6 343 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 PAPD5Q8NDF8 572 aaKnown RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 FBXO36Q8NEA4 188 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 C19orf18Q8NEA5 215 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 OR6J1Q8NGC5 347 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 OR11H4Q8NGC9 324 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 AP3S1Q92572 193 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 MARS2Q96GW9 593 aaKnown RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 ZNF764Q96H86 408 aaPredicted RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 C3orf30Q96M34 536 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 GAL3ST4Q96RP7 486 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 MCCC1Q96RQ3 725 aaPredicted RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 VAT1Q99536 393 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 TSNAXQ99598 290 aaKnown RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 AGPAT1Q99943 283 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 ZNF577Q9BSK1 485 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 AARSD1Q9BTE6 412 aaKnown RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 TMEM208Q9BTX3 173 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 MYL10Q9BUA6 226 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 AMNQ9BXJ7 453 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 ENKD1Q9H0I2 346 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 DUSP21Q9H596 190 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 NT5DC2Q9H857 520 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 SMURF1Q9HCE7 757 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 ZBTB26Q9HCK0 441 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 OBP2BQ9NPH6 170 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 ACOT13Q9NPJ3 140 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 CHRAC1Q9NRG0 131 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 SERINC1Q9NRX5 453 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 RBFOX1Q9NWB1 397 aaKnown RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 CACNA2D2Q9NY47 1150 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 SCN3BQ9NY72 215 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 OR12D3Q9UGF7 316 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 CLEC2DQ9UHP7 191 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 STAP1Q9ULZ2 295 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 NDRG2Q9UN36 371 aaKnown RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 RNF6Q9Y252 685 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 AAR2Q9Y312 384 aaKnown RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 RIMBP3Q9UFD9 1639 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 USP6P35125 1406 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 SPATA31A3Q5VYP0 1347 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 ADGRF5Q8IZF2 1346 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 LRRC37A3O60309 1634 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 ATRNL1Q5VV63 1379 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 LNP1A1A4G5 178 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 FAM227AF5H4B4 570 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 PGRMC2O15173 223 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 BCAT2O15382 392 aaPredicted RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 SIGLEC5O15389 551 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 SLC16A6O15403 523 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 FFAR2O15552 330 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 PPIHO43447 177 aaKnown RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 RGS10O43665 173 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 TPST1O60507 370 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 ICOSLGO75144 302 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 CILPO75339 1184 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 RAD17O75943 681 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 MLYCDO95822 493 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 IGHV2-5P01817 119 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 HIST1H2AGP0C0S8 130 aaPredicted RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 TMIGD3P0DMS9 266 aaPredicted RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 GAAP10253 952 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 AKR1A1P14550 325 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 PAMP19021 973 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 HIST1H2ADP20671 130 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 AGXTP21549 392 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 STOMP27105 288 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 SSTR4P31391 388 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 APOBEC3AP31941 199 aaPredicted RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 MAGEB1P43366 347 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 CDC34P49427 236 aaPredicted RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 CCR6P51684 374 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 ARSEP51690 589 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 CTSCP53634 463 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 PRRX1P54821 245 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 CXCR4P61073 352 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 HTD2P86397 168 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 TWF1Q12792 350 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 GPS1Q13098 491 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 FASTKQ14296 549 aaKnown RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 PTGR1Q14914 329 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 FCN2Q15485 313 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 ZNF79Q15937 498 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 ZNF630Q2M218 657 aaPredicted RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 ZNF284Q2VY69 593 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 NDUFAF6Q330K2 333 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 VPS26BQ4G0F5 336 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 CTXN3Q4LDR2 81 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 CBWD6Q4V339 395 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 HIST2H2AA3Q6FI13 130 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms