RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 AGTR1P30556 359 aa11.04□□□□□ -0.64
U2AF1-209ENST00000475639 ETV6P41212 452 aa11.04□□□□□ -0.64
U2AF1-209ENST00000475639 TAS2R39P59534 338 aa11.04□□□□□ -0.64
U2AF1-209ENST00000475639 ERVK-21P61565 698 aa11.04□□□□□ -0.64
U2AF1-209ENST00000475639 SNRPD2P62316 118 aaKnown RBP11.04□□□□□ -0.64
U2AF1-209ENST00000475639 ERVK-8P63133 956 aa11.04□□□□□ -0.64
U2AF1-209ENST00000475639 SEMA3AQ14563 771 aa11.04□□□□□ -0.64
U2AF1-209ENST00000475639 LRRC37A5PQ49AS3 106 aa11.04□□□□□ -0.64
U2AF1-209ENST00000475639 TECRLQ5HYJ1 363 aa11.04□□□□□ -0.64
U2AF1-209ENST00000475639 OR2T5Q6IEZ7 315 aa11.04□□□□□ -0.64
U2AF1-209ENST00000475639 TMEM220Q6QAJ8 160 aa11.04□□□□□ -0.64
U2AF1-209ENST00000475639 VSIG10LQ86VR7 867 aa11.04□□□□□ -0.64
U2AF1-209ENST00000475639 ZNF611Q8N823 705 aa11.04□□□□□ -0.64
U2AF1-209ENST00000475639 WDSUB1Q8N9V3 476 aa11.04□□□□□ -0.64
U2AF1-209ENST00000475639 OR2T29Q8NH02 315 aa11.04□□□□□ -0.64
U2AF1-209ENST00000475639 MAGEH1Q9H213 219 aa11.04□□□□□ -0.64
U2AF1-209ENST00000475639 MMP28Q9H239 520 aa11.04□□□□□ -0.64
U2AF1-209ENST00000475639 IGSF5Q9NSI5 407 aa11.04□□□□□ -0.64
U2AF1-209ENST00000475639 TMEFF2Q9UIK5 374 aaPredicted RBP11.04□□□□□ -0.64
U2AF1-209ENST00000475639 A8MUA0 341 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 CLIC1O00299 241 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 APC2O95996 2303 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 GTF2F2P13984 249 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 WASP42768 502 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 MAGEA11P43364 429 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 MRPS6P82932 125 aaKnown RBP11.03□□□□□ -0.64
U2AF1-209ENST00000475639 SP2Q02086 613 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 GPR68Q15743 365 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 NXPE1Q8N323 547 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 RPLP0P6Q8NHW5 317 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 TCTEX1D2Q8WW35 142 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 GIMAP5Q96F15 307 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 MTERF1Q99551 399 aaKnown RBP11.03□□□□□ -0.64
U2AF1-209ENST00000475639 ARL6Q9H0F7 186 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 UBQLN2Q9UHD9 624 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 TTLL8A6PVC2 850 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 EIF1AYO14602 144 aaKnown RBP11.03□□□□□ -0.64
U2AF1-209ENST00000475639 PDGFAP04085 211 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 CTSOP43234 321 aaPredicted RBP11.03□□□□□ -0.64
U2AF1-209ENST00000475639 EIF1AXP47813 144 aaKnown RBP11.03□□□□□ -0.64
U2AF1-209ENST00000475639 DIO3P55073 304 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 ZNF616Q08AN1 781 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 GBX1Q14549 363 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 MFSD13AQ14CX5 517 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 SLC9B2Q86UD5 537 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 CCDC190Q86UF4 302 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 ZSCAN1Q8NBB4 408 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 OR51D1Q8NGF3 324 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 STK35Q8TDR2 534 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 URM1Q9BTM9 101 aaKnown RBP11.03□□□□□ -0.64
U2AF1-209ENST00000475639 FAM198AQ9UFP1 575 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 AP1M2Q9Y6Q5 423 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 SMAD9O15198 467 aaKnown RBP11.03□□□□□ -0.64
U2AF1-209ENST00000475639 SLC31A1O15431 190 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 NDUFS1P28331 727 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 ZFP36L2P47974 494 aaKnown RBP11.03□□□□□ -0.64
U2AF1-209ENST00000475639 GLUD2P49448 558 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 DSTNP60981 165 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 BEX3Q00994 111 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 SCARB2Q14108 478 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 GANABQ14697 944 aaKnown RBP11.03□□□□□ -0.64
U2AF1-209ENST00000475639 SERPINA9Q86WD7 417 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 FAM129CQ86XR2 697 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 ATAD1Q8NBU5 361 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 COPS5Q92905 334 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 RELTQ969Z4 430 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 BCO2Q9BYV7 579 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 LIN7BQ9HAP6 207 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 Q9N2J8 555 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.03□□□□□ -0.64
U2AF1-209ENST00000475639 AHDC1Q5TGY3 1603 aaPredicted RBP11.03□□□□□ -0.64
U2AF1-209ENST00000475639 LY75O60449 1722 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 A0A1W2PQ45 241 aaPredicted RBP11.03□□□□□ -0.64
U2AF1-209ENST00000475639 A0A1W2PQY0 241 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 ZNF705FA8MVS1 300 aaPredicted RBP11.03□□□□□ -0.64
U2AF1-209ENST00000475639 PPP6CO00743 305 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 ECI2O75521 394 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 MT-ND5P03915 603 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 CSF2P04141 144 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 ZNF705DP0CH99 300 aaPredicted RBP11.03□□□□□ -0.64
U2AF1-209ENST00000475639 ZNF705BP0CI00 300 aaPredicted RBP11.03□□□□□ -0.64
U2AF1-209ENST00000475639 PRKXP51817 358 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 NCBP2P52298 156 aaKnown RBP eCLIP11.03□□□□□ -0.64
U2AF1-209ENST00000475639 MGAT3Q09327 533 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 AAK1Q2M2I8 961 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 FBXO48Q5FWF7 155 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 ENPP6Q6UWR7 440 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 OR4C15Q8NGM1 316 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 ASPNQ9BXN1 380 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 TPT1P8Q9HAU6 139 aa11.03□□□□□ -0.64
U2AF1-209ENST00000475639 COL11A2P13942 1736 aaPredicted RBP11.02□□□□□ -0.64
U2AF1-209ENST00000475639 SIP14410 1827 aa11.02□□□□□ -0.64
U2AF1-209ENST00000475639 A0A0B4J293 547 aa11.02□□□□□ -0.64
U2AF1-209ENST00000475639 MITFO75030 526 aaPredicted RBP11.02□□□□□ -0.64
U2AF1-209ENST00000475639 SOX9P48436 509 aa11.02□□□□□ -0.64
U2AF1-209ENST00000475639 FOXA1P55317 472 aa11.02□□□□□ -0.64
U2AF1-209ENST00000475639 HSD11B2P80365 405 aa11.02□□□□□ -0.64
U2AF1-209ENST00000475639 PLGLB1Q02325 96 aa11.02□□□□□ -0.64
U2AF1-209ENST00000475639 CRHR2Q13324 411 aa11.02□□□□□ -0.64
U2AF1-209ENST00000475639 TSTQ16762 297 aaKnown RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms