RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 TBR1Q16650 682 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.61□□□□□ -1.35
SHQ1-207ENST00000475558 DEFB134Q4QY38 66 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 TIGD2Q4W5G0 525 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 PAGE3Q5JUK9 113 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 INTS11Q5TA45 600 aaKnown RBP6.61□□□□□ -1.35
SHQ1-207ENST00000475558 C1orf146Q5VVC0 180 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 NKAIN2Q5VXU1 208 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 OR4F3Q6IEY1 312 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 FRMPD2BQ6IN97 320 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 TMEM64Q6YI46 380 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 TRIM73Q86UV7 250 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 ZNF761Q86XN6 746 aaPredicted RBP6.61□□□□□ -1.35
SHQ1-207ENST00000475558 PTRH1Q86Y79 214 aaKnown RBP6.61□□□□□ -1.35
SHQ1-207ENST00000475558 AQP12AQ8IXF9 295 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 FAM20CQ8IXL6 584 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 RNF175Q8N4F7 328 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 KRTCAP2Q8N6L1 136 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 ZNF511Q8NB15 262 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 KCT2Q8NC54 265 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 OR7A2PQ8NGA2 310 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 CDC26Q8NHZ8 85 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 DNAJB14Q8TBM8 379 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 STMN2Q93045 179 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 ASB9Q96DX5 294 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 EBPLQ9BY08 206 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 ASPSCR1Q9BZE9 553 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 ADNPQ9H2P0 1102 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 DCLRE1BQ9H816 532 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 FAM60AQ9NP50 221 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 LHX9Q9NQ69 397 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 FGF21Q9NSA1 209 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 CUTCQ9NTM9 273 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 KCMF1Q9P0J7 381 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 SUCOQ9UBS9 1254 aaKnown RBP6.61□□□□□ -1.35
SHQ1-207ENST00000475558 CD300AQ9UGN4 299 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 PRDM4Q9UKN5 801 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 KLHL20Q9Y2M5 609 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 MMACHCQ9Y4U1 282 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 PCDHB14Q9Y5E9 798 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 LRRK2Q5S007 2527 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 SPTAN1Q13813 2472 aaKnown RBP6.61□□□□□ -1.35
SHQ1-207ENST00000475558 PIKFYVEQ9Y2I7 2098 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 FLNCQ14315 2725 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 BSNQ9UPA5 3926 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 A0A087WV62 115 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 IGHV5-10-1A0A0J9YXX1 117 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 A0A1W2PQM1 296 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 A0A1W2PR48 441 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 ELOVL7A1L3X0 281 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 D6RAR5 112 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 RTCAO00442 366 aaKnown RBP6.6□□□□□ -1.35
SHQ1-207ENST00000475558 DSCR3O14972 297 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 POLR1CO15160 346 aaPredicted RBP6.6□□□□□ -1.35
SHQ1-207ENST00000475558 GSTA4O15217 222 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 CHST10O43529 356 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 TMPRSS11DO60235 418 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 MGRN1O60291 552 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 MAN1A2O60476 641 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 SH3BGRLO75368 114 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 KLHL18O94889 574 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 CPSF4O95639 269 aaKnown RBP6.6□□□□□ -1.35
SHQ1-207ENST00000475558 KLK3P07288 261 aaPredicted RBP6.6□□□□□ -1.35
SHQ1-207ENST00000475558 FGF5P12034 268 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 PVRP15151 417 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 IL1RNP18510 177 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 CD82P27701 267 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 GPC1P35052 558 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 ALDH9A1P49189 494 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 CCT3P49368 545 aaKnown RBP6.6□□□□□ -1.35
SHQ1-207ENST00000475558 PRIM2P49643 509 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 WNT3P56703 355 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 ACTR3P61158 418 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 AP2B1P63010 937 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 ELF3P78545 371 aaPredicted RBP6.6□□□□□ -1.35
SHQ1-207ENST00000475558 MC2RQ01718 297 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 TNFRSF17Q02223 184 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 RUNX2Q13950 521 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 TMEM164Q5U3C3 297 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 IRAK1BP1Q5VVH5 260 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 RHBDD2Q6NTF9 364 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 SLC2A7Q6PXP3 512 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 RIPOR1Q6ZS17 1223 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 B3GNT8Q7Z7M8 397 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 DHFR2Q86XF0 187 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 PPP1R3BQ86XI6 285 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 SFTPA2Q8IWL1 248 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 EID3Q8N140 333 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 KIF2BQ8N4N8 673 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 OR56A1Q8NGH5 318 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 OR52N2Q8NGI0 321 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 OR4A15Q8NGL6 344 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 CLHC1Q8NHS4 586 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 SFXN5Q8TD22 340 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 RASSF5Q8WWW0 418 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 GFM2Q969S9 779 aaKnown RBP6.6□□□□□ -1.35
SHQ1-207ENST00000475558 TMEM125Q96AQ2 219 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 FKBP10Q96AY3 582 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 TBC1D20Q96BZ9 403 aa6.6□□□□□ -1.35
SHQ1-207ENST00000475558 FAM120BQ96EK7 910 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms