RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 ICKQ9UPZ9 632 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 HMX3A6NHT5 357 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 PRKYO43930 277 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 APOL3O95236 402 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 MANFP55145 182 aaKnown RBP20■□□□□ 0.79
COL18A1-207ENST00000473212 WDR5P61964 334 aaKnown RBP20■□□□□ 0.79
COL18A1-207ENST00000473212 GLYR1Q49A26 553 aaPredicted RBP20■□□□□ 0.79
COL18A1-207ENST00000473212 SLC9B2Q86UD5 537 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 SLC7A13Q8TCU3 470 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 ZDHHC5Q9C0B5 715 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 SERHL2Q9H4I8 314 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 A4GALTQ9NPC4 353 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20■□□□□ 0.79
COL18A1-207ENST00000473212 TBC1D14Q9P2M4 693 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 ASF1AQ9Y294 204 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 A0A1W2PQL4 384 aaPredicted RBP19.99■□□□□ 0.79
COL18A1-207ENST00000473212 PRAMEF27A3QJZ7 478 aa19.99■□□□□ 0.79
COL18A1-207ENST00000473212 MSL3P1P0C860 447 aa19.99■□□□□ 0.79
COL18A1-207ENST00000473212 IKBIPQ70UQ0 350 aa19.99■□□□□ 0.79
COL18A1-207ENST00000473212 ANKRD33Q7Z3H0 272 aa19.99■□□□□ 0.79
COL18A1-207ENST00000473212 SZRD1Q7Z422 152 aa19.99■□□□□ 0.79
COL18A1-207ENST00000473212 UBE2J2Q8N2K1 259 aa19.99■□□□□ 0.79
COL18A1-207ENST00000473212 OR5D16Q8NGK9 328 aa19.99■□□□□ 0.79
COL18A1-207ENST00000473212 ZNF296Q8WUU4 475 aaPredicted RBP19.99■□□□□ 0.79
COL18A1-207ENST00000473212 NXPE3Q969Y0 559 aa19.99■□□□□ 0.79
COL18A1-207ENST00000473212 EXOSC8Q96B26 276 aaKnown RBP19.99■□□□□ 0.79
COL18A1-207ENST00000473212 COQ10AQ96MF6 247 aa19.99■□□□□ 0.79
COL18A1-207ENST00000473212 NELL2Q99435 816 aa19.99■□□□□ 0.79
COL18A1-207ENST00000473212 TMEM246Q9BRR3 403 aa19.99■□□□□ 0.79
COL18A1-207ENST00000473212 TAC3Q9UHF0 121 aa19.99■□□□□ 0.79
COL18A1-207ENST00000473212 HCN2Q9UL51 889 aa19.99■□□□□ 0.79
COL18A1-207ENST00000473212 A0A0C4DFX4 3053 aa19.99■□□□□ 0.79
COL18A1-207ENST00000473212 CHD9Q3L8U1 2897 aa19.99■□□□□ 0.79
COL18A1-207ENST00000473212 NNMTP40261 264 aa19.99■□□□□ 0.79
COL18A1-207ENST00000473212 ETV5P41161 510 aa19.99■□□□□ 0.79
COL18A1-207ENST00000473212 GPR1P46091 355 aa19.99■□□□□ 0.79
COL18A1-207ENST00000473212 ETV1P50549 477 aa19.99■□□□□ 0.79
COL18A1-207ENST00000473212 PIN1Q13526 163 aaPredicted RBP19.99■□□□□ 0.79
COL18A1-207ENST00000473212 FBXO15Q8NCQ5 510 aaPredicted RBP19.99■□□□□ 0.79
COL18A1-207ENST00000473212 OR52I1Q8NGK6 324 aa19.99■□□□□ 0.79
COL18A1-207ENST00000473212 DIRAS2Q96HU8 199 aa19.99■□□□□ 0.79
COL18A1-207ENST00000473212 SLC22A4Q9H015 551 aa19.99■□□□□ 0.79
COL18A1-207ENST00000473212 C11orf54Q9H0W9 315 aaPredicted RBP19.99■□□□□ 0.79
COL18A1-207ENST00000473212 PAQR5Q9NXK6 330 aaPredicted RBP19.99■□□□□ 0.79
COL18A1-207ENST00000473212 NFKBIL1Q9UBC1 381 aaPredicted RBP19.99■□□□□ 0.79
COL18A1-207ENST00000473212 NUFIP1Q9UHK0 495 aaKnown RBP19.99■□□□□ 0.79
COL18A1-207ENST00000473212 SNX7Q9UNH6 387 aa19.99■□□□□ 0.79
COL18A1-207ENST00000473212 YARS2Q9Y2Z4 477 aaKnown RBP19.99■□□□□ 0.79
COL18A1-207ENST00000473212 HEATR5BQ9P2D3 2071 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 FABP12A6NFH5 140 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 ANHXE9PGG2 379 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 PRKRAO75569 313 aaKnown RBP19.98■□□□□ 0.79
COL18A1-207ENST00000473212 TP53P04637 393 aaPredicted RBP19.98■□□□□ 0.79
COL18A1-207ENST00000473212 RHOP08100 348 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 CSF3P09919 207 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 OCLNQ16625 522 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 FLYWCH1Q4VC44 716 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 ATAT1Q5SQI0 421 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 PRAMEF14Q5SWL7 426 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 PRAMEF13Q5VWM6 474 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 C6orf120Q7Z4R8 191 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 GALNT6Q8NCL4 622 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 CREB3L4Q8TEY5 395 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 RANGRFQ9HD47 186 aaPredicted RBP19.98■□□□□ 0.79
COL18A1-207ENST00000473212 PLEKHB1Q9UF11 243 aaPredicted RBP19.98■□□□□ 0.79
COL18A1-207ENST00000473212 CARD8Q9Y2G2 431 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 CCDC182A6NF36 153 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 TMCC2O75069 709 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 NTN1O95631 604 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 CSF2P04141 144 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 ASAH1Q13510 395 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 ZNF77Q15935 545 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 SYPL1Q16563 259 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 SPDYE7PQ495Y7 208 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 PLPP4Q5VZY2 271 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 CACUL1Q86Y37 369 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 FAM181AQ8N9Y4 354 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 PLA2G15Q8NCC3 412 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 ARRDC3Q96B67 414 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 DHRS1Q96LJ7 313 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 ZNF354BQ96LW1 612 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 FYTTD1Q96QD9 318 aaKnown RBP19.98■□□□□ 0.79
COL18A1-207ENST00000473212 TEFMQ96QE5 360 aaKnown RBP19.98■□□□□ 0.79
COL18A1-207ENST00000473212 BEX2Q9BXY8 128 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 TEX10Q9NXF1 929 aaPredicted RBP19.98■□□□□ 0.79
COL18A1-207ENST00000473212 SLC23A2Q9UGH3 650 aa19.98■□□□□ 0.79
COL18A1-207ENST00000473212 M0R3H8 397 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 DDCP20711 480 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 ACADLP28330 430 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 SSTR4P31391 388 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 RPS5P46782 204 aaKnown RBP19.97■□□□□ 0.79
COL18A1-207ENST00000473212 KCNJ5P48544 419 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 PDZK1Q5T2W1 519 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 PRR23CQ6ZRP0 262 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 CCDC149Q6ZUS6 474 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 C11orf74Q86VG3 221 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 SIRT3Q9NTG7 399 aaPredicted RBP19.97■□□□□ 0.79
COL18A1-207ENST00000473212 TMEM39AQ9NV64 488 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 SEC14L3Q9UDX4 400 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 SPIN1Q9Y657 262 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms