RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 OR7G1Q8NGA0 311 aa14.2□□□□□ -0.14
SDC3-203ENST00000471567 CDC26Q8NHZ8 85 aa14.2□□□□□ -0.14
SDC3-203ENST00000471567 EXOSC8Q96B26 276 aaKnown RBP14.2□□□□□ -0.14
SDC3-203ENST00000471567 C19orf60Q96EN9 201 aa14.2□□□□□ -0.14
SDC3-203ENST00000471567 ZNF764Q96H86 408 aaPredicted RBP14.2□□□□□ -0.14
SDC3-203ENST00000471567 MIEF1Q9NQG6 463 aa14.2□□□□□ -0.14
SDC3-203ENST00000471567 PCDHGB6Q9Y5F9 930 aa14.2□□□□□ -0.14
SDC3-203ENST00000471567 BSNQ9UPA5 3926 aa14.2□□□□□ -0.14
SDC3-203ENST00000471567 ATP6AP2A0A1C7CYW4 349 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 HRKO00198 91 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 TBX19O60806 448 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 PRAMEF2O60811 474 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 ITGA10O75578 1167 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 ATP6AP2O75787 350 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 F10P00742 488 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 BCKDHAP12694 445 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 SDC1P18827 310 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 TACR1P25103 407 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 CYB561P49447 251 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 HLCSP50747 726 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 HK2P52789 917 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 SLC37A1P57057 533 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 OC90Q02509 493 aaPredicted RBP14.19□□□□□ -0.14
SDC3-203ENST00000471567 TLE1Q04724 770 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 MAD2L1Q13257 205 aaPredicted RBP14.19□□□□□ -0.14
SDC3-203ENST00000471567 INPP5JQ15735 1006 aaPredicted RBP14.19□□□□□ -0.14
SDC3-203ENST00000471567 PDCD2Q16342 344 aaPredicted RBP14.19□□□□□ -0.14
SDC3-203ENST00000471567 MPEG1Q2M385 716 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 PRICKLE4Q2TBC4 344 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 TICAM1Q8IUC6 712 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 GPALPP1Q8IXQ4 340 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 MDS2Q8NDY4 140 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 ZNF675Q8TD23 568 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 THAP3Q8WTV1 239 aaPredicted RBP14.19□□□□□ -0.14
SDC3-203ENST00000471567 CTHRC1Q96CG8 243 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 TUBGCP3Q96CW5 907 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 ERP27Q96DN0 273 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 EGLN2Q96KS0 407 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 LUZP4Q9P127 313 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 EXO1Q9UQ84 846 aaKnown RBP14.19□□□□□ -0.14
SDC3-203ENST00000471567 ENTPD4Q9Y227 616 aa14.19□□□□□ -0.14
SDC3-203ENST00000471567 MYO1GB0I1T2 1018 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 VPS4BO75351 444 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 CLPSP04118 112 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 CT62P0C5K7 136 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 PRPS2P11908 318 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 PLA2G2AP14555 144 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 S1PR1P21453 382 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 MPIP34949 423 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 SSR4P51571 173 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 PPP2R2AP63151 447 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 OCRLQ01968 901 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 EMX2Q04743 252 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 MGAT2Q10469 447 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 OR1C1Q15619 314 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 INAQ16352 499 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 SLC29A4Q7RTT9 530 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 C9orf40Q8IXQ3 194 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 CCDC116Q8IYX3 515 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 LRRC34Q8IZ02 419 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 VWA5B2Q8N398 1253 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 TMEM156Q8N614 296 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 SLC15A4Q8N697 577 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 ZNF615Q8N8J6 731 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 FNDC5Q8NAU1 212 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 DOK4Q8TEW6 326 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 ZNF75CPQ92670 426 aaPredicted RBP14.18□□□□□ -0.14
SDC3-203ENST00000471567 MTERF3Q96E29 417 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 TSSK3Q96PN8 268 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 BBS4Q96RK4 519 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 REEP4Q9H6H4 257 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 PNPOQ9NVS9 261 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 MAT2BQ9NZL9 334 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 LRFN1Q9P244 771 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 ZNF639Q9UID6 485 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 CFL2Q9Y281 166 aa14.18□□□□□ -0.14
SDC3-203ENST00000471567 UQCRHLA0A096LP55 91 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 SLCO1B7G3V0H7 640 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 WWP2O00308 870 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 BCAS2O75934 225 aaPredicted RBP14.17□□□□□ -0.14
SDC3-203ENST00000471567 OR2J2O76002 312 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 NEURL1O76050 574 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 SLITRK5O94991 958 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 JUNP05412 331 aaKnown RBP14.17□□□□□ -0.14
SDC3-203ENST00000471567 CD46P15529 392 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 DDX5P17844 614 aaKnown RBP14.17□□□□□ -0.14
SDC3-203ENST00000471567 SSTR4P31391 388 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 RPL3P39023 403 aaKnown RBP14.17□□□□□ -0.14
SDC3-203ENST00000471567 MLLT10P55197 1068 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 DUSP2Q05923 314 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 EBPQ15125 230 aaKnown RBP14.17□□□□□ -0.14
SDC3-203ENST00000471567 PIGGQ5H8A4 983 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 ZNF766Q5HY98 468 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 ZNF468Q5VIY5 522 aaPredicted RBP14.17□□□□□ -0.14
SDC3-203ENST00000471567 IL23RQ5VWK5 629 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 SPINK14Q6IE38 97 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 FAM180BQ6P0A1 224 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 FAM111BQ6SJ93 734 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 R3HCC1LQ7Z5L2 792 aaKnown RBP14.17□□□□□ -0.14
SDC3-203ENST00000471567 FAM9CQ8IZT9 166 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms