RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 CCDC80Q76M96 950 aa17.82■□□□□ 0.44
SMC4-209ENST00000468653 GPR135Q8IZ08 494 aa17.82■□□□□ 0.44
SMC4-209ENST00000468653 METTL27Q8N6F8 245 aaPredicted RBP17.82■□□□□ 0.44
SMC4-209ENST00000468653 ADAMTS18Q8TE60 1221 aa17.82■□□□□ 0.44
SMC4-209ENST00000468653 XAGE5Q8WWM1 108 aa17.82■□□□□ 0.44
SMC4-209ENST00000468653 PEX11GQ96HA9 241 aa17.82■□□□□ 0.44
SMC4-209ENST00000468653 HSH2DQ96JZ2 352 aa17.82■□□□□ 0.44
SMC4-209ENST00000468653 RBCK1Q9BYM8 510 aa17.82■□□□□ 0.44
SMC4-209ENST00000468653 SERHL2Q9H4I8 314 aa17.82■□□□□ 0.44
SMC4-209ENST00000468653 CUTCQ9NTM9 273 aa17.82■□□□□ 0.44
SMC4-209ENST00000468653 DDX18Q9NVP1 670 aaKnown RBP17.82■□□□□ 0.44
SMC4-209ENST00000468653 SERTAD3Q9UJW9 196 aa17.82■□□□□ 0.44
SMC4-209ENST00000468653 CNOT11Q9UKZ1 510 aaKnown RBP17.82■□□□□ 0.44
SMC4-209ENST00000468653 MRPS33Q9Y291 106 aaKnown RBP17.82■□□□□ 0.44
SMC4-209ENST00000468653 SPTBP11277 2137 aa17.82■□□□□ 0.44
SMC4-209ENST00000468653 USP34Q70CQ2 3546 aa17.82■□□□□ 0.44
SMC4-209ENST00000468653 MYOCOSA0A1B0GUC4 107 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 CST1P01037 141 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 HMGN2P05204 90 aaKnown RBP17.81■□□□□ 0.44
SMC4-209ENST00000468653 PPP2R1BP30154 601 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.81■□□□□ 0.44
SMC4-209ENST00000468653 PRR23CQ6ZRP0 262 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 VTCN1Q7Z7D3 282 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 ZDHHC21Q8IVQ6 265 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 OR1L3Q8NH93 324 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 SLC38A5Q8WUX1 472 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 LOXL4Q96JB6 756 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 YIPF4Q9BSR8 244 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 LRRN3Q9H3W5 708 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 EQTNQ9NQ60 294 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 AK5Q9Y6K8 562 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 A0A1W2PQM1 296 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 H0YIG0 161 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 M0QX08 132 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 GNGT2O14610 69 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 KHNYNO15037 678 aaKnown RBP17.81■□□□□ 0.44
SMC4-209ENST00000468653 TFPTP0C1Z6 253 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 CKMT1AP12532 417 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 NT5EP21589 574 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 ALAS2P22557 587 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 DUSP3P51452 185 aaPredicted RBP17.81■□□□□ 0.44
SMC4-209ENST00000468653 CRYBA2P53672 197 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 ITGA1P56199 1179 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 MRPS35P82673 323 aaKnown RBP17.81■□□□□ 0.44
SMC4-209ENST00000468653 ELOAQ14241 798 aaKnown RBP17.81■□□□□ 0.44
SMC4-209ENST00000468653 ZNF574Q6ZN55 896 aaPredicted RBP17.81■□□□□ 0.44
SMC4-209ENST00000468653 TTLL10Q6ZVT0 673 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 TMPRSS9Q7Z410 1059 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 PATL1Q86TB9 770 aaKnown RBP17.81■□□□□ 0.44
SMC4-209ENST00000468653 OR7G2Q8NG99 324 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 OR5D16Q8NGK9 328 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 IFI44Q8TCB0 444 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 ANKRD9Q96BM1 317 aaPredicted RBP17.81■□□□□ 0.44
SMC4-209ENST00000468653 TMEM19Q96HH6 336 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 C9orf16Q9BUW7 83 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 ANKRA2Q9H9E1 313 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 FANCEQ9HB96 536 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 P2RX2Q9UBL9 471 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 DNAJB9Q9UBS3 223 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 NDOR1Q9UHB4 597 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 RAB23Q9ULC3 237 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 OAZ3Q9UMX2 235 aa17.81■□□□□ 0.44
SMC4-209ENST00000468653 BLACEA4D250 179 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 H3BMH7 237 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 UPK1AO00322 258 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 PLOD2O00469 737 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 SLC28A2O43868 658 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 OPN1SWP03999 348 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 ATP1B1P05026 303 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 MSL3P1P0C860 447 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 ZNF26P17031 533 aaPredicted RBP17.8■□□□□ 0.44
SMC4-209ENST00000468653 PCBP3P57721 371 aaKnown RBP17.8■□□□□ 0.44
SMC4-209ENST00000468653 SELENOWP63302 87 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 SLC13A2Q13183 592 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 MYBPC3Q14896 1274 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 NRF1Q16656 503 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 SYT16Q17RD7 645 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 CMPK2Q5EBM0 449 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 CRB2Q5IJ48 1285 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 TLDC1Q6P9B6 456 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 ZC3H14Q6PJT7 736 aaKnown RBP17.8■□□□□ 0.44
SMC4-209ENST00000468653 ZNF595Q8IYB9 648 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 OR4D9Q8NGE8 314 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 LZICQ8WZA0 190 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 ZNF570Q96NI8 536 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 NDC1Q9BTX1 674 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 DOHHQ9BU89 302 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 ENAMQ9NRM1 1142 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 FGF21Q9NSA1 209 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 PTGFRNQ9P2B2 879 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 BAG5Q9UL15 447 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 PCDHGA5Q9Y5G8 931 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 SCN2AQ99250 2005 aa17.8■□□□□ 0.44
SMC4-209ENST00000468653 CLDN4O14493 209 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 BMP10O95393 424 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 RPSAP08865 295 aaKnown RBP17.79■□□□□ 0.44
SMC4-209ENST00000468653 NR2F1P10589 423 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 ZNF23P17027 643 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 CLCN2P51788 898 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 TXNL4AP83876 142 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms