RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 OR2T11Q8NH01 316 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 CEP70Q8NHQ1 597 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 HUS1BQ8NHY5 278 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 CDC26Q8NHZ8 85 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 FLVCR1-AS1Q8TAF5 88 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 HMGCLL1Q8TB92 370 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 TBC1D15Q8TC07 691 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 C10orf82Q8WW14 230 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 SLC13A3Q8WWT9 602 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 UBE2E3Q969T4 207 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 ZUFSPQ96AP4 578 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 C19orf60Q96EN9 201 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 APIPQ96GX9 242 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 TRAPPC9Q96Q05 1148 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 FRG2BQ96QU4 278 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 F2RL3Q96RI0 385 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 GFM1Q96RP9 751 aaKnown RBP3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 NUDT22Q9BRQ3 303 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 C1orf50Q9BV19 199 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 C1orf43Q9BWL3 253 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 SORBS1Q9BX66 1292 aaKnown RBP3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 EBPLQ9BY08 206 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 SLC29A3Q9BZD2 475 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 SPRTNQ9H040 489 aaPredicted RBP3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 LRRN3Q9H3W5 708 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 KLHL31Q9H511 634 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 UCK1Q9HA47 277 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 MEAF6Q9HAF1 191 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 LRTM1Q9HBL6 345 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 TCF7L2Q9NQB0 619 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 PFDN4Q9NQP4 134 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 BAIAP2L1Q9UHR4 511 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 EIF3LQ9Y262 564 aaKnown RBP3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 POLR3HQ9Y535 204 aaPredicted RBP3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 U3KQA8 63 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 NCOR1O75376 2440 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 TRIOO75962 3097 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 LRP4O75096 1905 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 ARHGEF17Q96PE2 2063 aaPredicted RBP3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 TNRC6BQ9UPQ9 1833 aaKnown RBP3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 LOC105369274A0A096LPK9 316 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 LOC102723532A0A0G2JNH3 316 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 LOC100653049A0A140TA62 436 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 A0A1W2PQM1 296 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 TRBC2A0A5B9 178 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 ERICH4A6NGS2 130 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 C9JVG2 144 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 H0YIV9 168 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 RNASET2O00584 256 aaKnown RBP3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 FCHO1O14526 889 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 UBDO15205 165 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 NDUFS4O43181 175 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 TNFSF14O43557 240 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 HCRTR1O43613 425 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 UGDHO60701 494 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 CCDC22O60826 627 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 CTSVO60911 334 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 FAM20BO75063 409 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 VPS4BO75351 444 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 KRT34O76011 436 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 PRSS23O95084 383 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 LRATO95237 230 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 ETHE1O95571 254 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 CPNE6O95741 557 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 KLK1P06870 262 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 ZNF883P0CG24 379 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 HRH2P25021 359 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 GNALP38405 381 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 CAPZBP47756 277 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 PLA2G16P53816 162 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 DIO3P55073 304 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 CLDN6P56747 220 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 STX1BP61266 288 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 RPS15AP62244 130 aaKnown RBP3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 RPL38P63173 70 aaKnown RBP3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 BTN3A2P78410 334 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 GABPB1Q06547 395 aaPredicted RBP3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 FOXM1Q08050 763 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 RGS1Q08116 209 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 ACSM2AQ08AH3 577 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 GALEQ14376 348 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 GGTA1PQ4G0N0 100 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 RFTN2Q52LD8 501 aaPredicted RBP3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 PDCD4Q53EL6 469 aaKnown RBP3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 C6orf136Q5SQH8 315 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 WASHC2DQ5SRD0 308 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 TMTC4Q5T4D3 741 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 IL23RQ5VWK5 629 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 ACSM2BQ68CK6 577 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 FRMPD2BQ6IN97 320 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 ZNF425Q6IV72 752 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 ZNF771Q7L3S4 317 aaPredicted RBP3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 ASCL5Q7RTU5 278 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 TMPRSS9Q7Z410 1059 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 SPATA19Q7Z5L4 167 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 ASPGQ86U10 573 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 LAS2Q8IYD9 372 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 KIRREL3Q8IZU9 778 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 OR4N4Q8N0Y3 316 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 LIX1Q8N485 282 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms