RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 ALDH3A1P30838 453 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 ADORA2A-AS1P86434 159 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 PLIN5Q00G26 463 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 ZNF844Q08AG5 666 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 ASPHQ12797 758 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 ZNF267Q14586 743 aaPredicted RBP13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 IMPG1Q17R60 797 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 SPDYAQ5MJ70 313 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 OR52E8Q6IFG1 317 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 GPALPP1Q8IXQ4 340 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 ST13P4Q8IZP2 240 aaPredicted RBP13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 OR4K14Q8NGD5 310 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 VKORC1Q9BQB6 163 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 MECRQ9BV79 373 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 ACPTQ9BZG2 426 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 MKS1Q9NXB0 559 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 COPS7AQ9UBW8 275 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 NPIPA1Q9UND3 350 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 OTOGQ6ZRI0 2925 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 AKAP9Q99996 3911 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 PKDREJQ9NTG1 2253 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 H3BQF6 201 aa13.03□□□□□ -0.32
CCHCR1-211ENST00000467553 WWP2O00308 870 aa13.03□□□□□ -0.32
CCHCR1-211ENST00000467553 ERAL1O75616 437 aaKnown RBP13.03□□□□□ -0.32
CCHCR1-211ENST00000467553 ABOP16442 354 aa13.03□□□□□ -0.32
CCHCR1-211ENST00000467553 GRNP28799 593 aaKnown RBP13.03□□□□□ -0.32
CCHCR1-211ENST00000467553 ALDH9A1P49189 494 aa13.03□□□□□ -0.32
CCHCR1-211ENST00000467553 XKP51811 444 aa13.03□□□□□ -0.32
CCHCR1-211ENST00000467553 RNF4P78317 190 aa13.03□□□□□ -0.32
CCHCR1-211ENST00000467553 ACSM2AQ08AH3 577 aa13.03□□□□□ -0.32
CCHCR1-211ENST00000467553 ZNF750Q32MQ0 723 aa13.03□□□□□ -0.32
CCHCR1-211ENST00000467553 CEP85LQ5SZL2 805 aa13.03□□□□□ -0.32
CCHCR1-211ENST00000467553 ACSM2BQ68CK6 577 aa13.03□□□□□ -0.32
CCHCR1-211ENST00000467553 MMP21Q8N119 569 aa13.03□□□□□ -0.32
CCHCR1-211ENST00000467553 C16orf52Q8NHV5 167 aa13.03□□□□□ -0.32
CCHCR1-211ENST00000467553 ZNF721Q8TF20 911 aa13.03□□□□□ -0.32
CCHCR1-211ENST00000467553 RIT1Q92963 219 aa13.03□□□□□ -0.32
CCHCR1-211ENST00000467553 APIPQ96GX9 242 aa13.03□□□□□ -0.32
CCHCR1-211ENST00000467553 ZIM3Q96PE6 472 aa13.03□□□□□ -0.32
CCHCR1-211ENST00000467553 PELOQ9BRX2 385 aaKnown RBP13.03□□□□□ -0.32
CCHCR1-211ENST00000467553 CNPPD1Q9BV87 410 aa13.03□□□□□ -0.32
CCHCR1-211ENST00000467553 TNFRSF12AQ9NP84 129 aa13.03□□□□□ -0.32
CCHCR1-211ENST00000467553 RYDENQ9NUL5 291 aaKnown RBP13.03□□□□□ -0.32
CCHCR1-211ENST00000467553 TINAGQ9UJW2 476 aa13.03□□□□□ -0.32
CCHCR1-211ENST00000467553 YARS2Q9Y2Z4 477 aaKnown RBP13.03□□□□□ -0.32
CCHCR1-211ENST00000467553 FIS1Q9Y3D6 152 aa13.03□□□□□ -0.32
CCHCR1-211ENST00000467553 PCDHA9Q9Y5H5 950 aa13.03□□□□□ -0.32
CCHCR1-211ENST00000467553 ADGRG4Q8IZF6 3080 aa13.02□□□□□ -0.32
CCHCR1-211ENST00000467553 PDZD2O15018 2839 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 GNG14A0A1W2PPG7 69 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 A0A1W2PS29 197 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 C1orf226A1L170 272 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 TMEM200CA6NKL6 621 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 HRKO00198 91 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 CTIFO43310 598 aaKnown RBP13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 PCDH7O60245 1069 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 OR2J2O76002 312 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 SLC35E2P0CK97 266 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 UROSP10746 265 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 PORP16435 677 aaPredicted RBP13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 SSTR2P30874 369 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 SSR4P51571 173 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 HK2P52789 917 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 TRA2BP62995 288 aaKnown RBP13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 ERVK-8P63133 956 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 RAE1P78406 368 aaKnown RBP13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 SPIN4Q56A73 249 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 CLEC6AQ6EIG7 209 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 IL20RBQ6UXL0 311 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 OR5L2Q8NGL0 311 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 ART5Q96L15 291 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 SPOCK3Q9BQ16 436 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 FAIM2Q9BWQ8 316 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 SENP1Q9P0U3 644 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 MYOTQ9UBF9 498 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 MCM8Q9UJA3 840 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 SH3BGRL2Q9UJC5 107 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 CES1P1Q9UKY3 287 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 PSME2Q9UL46 239 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 ERVK-11Q9UQG0 969 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 ERVK-19Q9WJR5 959 aa13.02□□□□□ -0.33
CCHCR1-211ENST00000467553 CSMD2Q7Z408 3487 aa13.01□□□□□ -0.33
CCHCR1-211ENST00000467553 SERTM1A2A2V5 107 aa13.01□□□□□ -0.33
CCHCR1-211ENST00000467553 AZIN1O14977 448 aa13.01□□□□□ -0.33
CCHCR1-211ENST00000467553 CAPN3P20807 821 aa13.01□□□□□ -0.33
CCHCR1-211ENST00000467553 NT5EP21589 574 aa13.01□□□□□ -0.33
CCHCR1-211ENST00000467553 FEN1P39748 380 aaKnown RBP13.01□□□□□ -0.33
CCHCR1-211ENST00000467553 TMEM211Q6ICI0 200 aa13.01□□□□□ -0.33
CCHCR1-211ENST00000467553 FAM180BQ6P0A1 224 aa13.01□□□□□ -0.33
CCHCR1-211ENST00000467553 SLC48A1Q6P1K1 146 aa13.01□□□□□ -0.33
CCHCR1-211ENST00000467553 PAOXQ6QHF9 649 aa13.01□□□□□ -0.33
CCHCR1-211ENST00000467553 RGS9BPQ6ZS82 235 aa13.01□□□□□ -0.33
CCHCR1-211ENST00000467553 ZCCHC23Q6ZST2 131 aa13.01□□□□□ -0.33
CCHCR1-211ENST00000467553 EXOC3L1Q86VI1 746 aa13.01□□□□□ -0.33
CCHCR1-211ENST00000467553 ZNF227Q86WZ6 799 aa13.01□□□□□ -0.33
CCHCR1-211ENST00000467553 DOLPP1Q86YN1 238 aa13.01□□□□□ -0.33
CCHCR1-211ENST00000467553 CYP4Z2PQ8N1L4 340 aa13.01□□□□□ -0.33
CCHCR1-211ENST00000467553 OR8K3Q8NH51 312 aa13.01□□□□□ -0.33
CCHCR1-211ENST00000467553 C16orf78Q8WTQ4 265 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms