RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 MAP7D3Q8IWC1 876 aa5.06□□□□□ -1.6
PTCD3-207ENST00000467273 BEST3Q8N1M1 668 aa5.06□□□□□ -1.6
PTCD3-207ENST00000467273 SLC5A8Q8N695 610 aa5.06□□□□□ -1.6
PTCD3-207ENST00000467273 NIPA2Q8N8Q9 360 aa5.06□□□□□ -1.6
PTCD3-207ENST00000467273 PDPRQ8NCN5 879 aa5.06□□□□□ -1.6
PTCD3-207ENST00000467273 CCNYQ8ND76 341 aa5.06□□□□□ -1.6
PTCD3-207ENST00000467273 TOR1AIP2Q8NFQ8 470 aa5.06□□□□□ -1.6
PTCD3-207ENST00000467273 C16orf52Q8NHV5 167 aa5.06□□□□□ -1.6
PTCD3-207ENST00000467273 M1APQ8TC57 530 aa5.06□□□□□ -1.6
PTCD3-207ENST00000467273 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-207ENST00000467273 METTL21AQ8WXB1 218 aa5.06□□□□□ -1.6
PTCD3-207ENST00000467273 CTNNBL1Q8WYA6 563 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-207ENST00000467273 ZNF566Q969W8 418 aa5.06□□□□□ -1.6
PTCD3-207ENST00000467273 ZNF845Q96IR2 970 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-207ENST00000467273 SELENOSQ9BQE4 189 aa5.06□□□□□ -1.6
PTCD3-207ENST00000467273 MESP1Q9BRJ9 268 aa5.06□□□□□ -1.6
PTCD3-207ENST00000467273 MAK16Q9BXY0 300 aaKnown RBP5.06□□□□□ -1.6
PTCD3-207ENST00000467273 CLSTN2Q9H4D0 955 aa5.06□□□□□ -1.6
PTCD3-207ENST00000467273 XKR8Q9H6D3 395 aa5.06□□□□□ -1.6
PTCD3-207ENST00000467273 PLEKHF2Q9H8W4 249 aa5.06□□□□□ -1.6
PTCD3-207ENST00000467273 TRIM45Q9H8W5 580 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-207ENST00000467273 SERHLQ9NQF3 203 aa5.06□□□□□ -1.6
PTCD3-207ENST00000467273 KLHL1Q9NR64 748 aa5.06□□□□□ -1.6
PTCD3-207ENST00000467273 SPHK1Q9NYA1 384 aa5.06□□□□□ -1.6
PTCD3-207ENST00000467273 XPR1Q9UBH6 696 aa5.06□□□□□ -1.6
PTCD3-207ENST00000467273 C19orf25Q9UFG5 118 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-207ENST00000467273 ASF1AQ9Y294 204 aa5.06□□□□□ -1.6
PTCD3-207ENST00000467273 KLF13Q9Y2Y9 288 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-207ENST00000467273 NOSIPQ9Y314 301 aaKnown RBP5.06□□□□□ -1.6
PTCD3-207ENST00000467273 SONP18583 2426 aaKnown RBP5.06□□□□□ -1.6
PTCD3-207ENST00000467273 SNRNP200O75643 2136 aaKnown RBP5.05□□□□□ -1.6
PTCD3-207ENST00000467273 IGLV3-16A0A075B6K0 115 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 A0A1B0GTH9 108 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 MBD3L4A6NDZ8 208 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-207ENST00000467273 MBD3L3A6NE82 208 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-207ENST00000467273 A8MUI8 341 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 A8MVJ9 347 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 KLRC4-KLRK1H3BQV0 150 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 H7C1Q1 480 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 MYO1CO00159 1063 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 KCNK1O00180 336 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 SYT5O00445 386 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 CES2O00748 559 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 TFECO14948 347 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-207ENST00000467273 STX7O15400 261 aaKnown RBP5.05□□□□□ -1.6
PTCD3-207ENST00000467273 SRP72O76094 671 aaKnown RBP5.05□□□□□ -1.6
PTCD3-207ENST00000467273 RPN2P04844 631 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 CELA2AP08217 269 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 C8orf89P0DMQ9 161 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 TFEBP19484 476 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 ACVR2AP27037 513 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 ACADLP28330 430 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 PTGER1P34995 402 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 SLC26A3P40879 764 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 AGTR2P50052 363 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 ALDH3A2P51648 485 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 ARSEP51690 589 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 NUP107P57740 925 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 C21orf58P58505 322 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 TAS2R50P59544 299 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 MXRA7P84157 204 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 OC90Q02509 493 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-207ENST00000467273 SLC25A11Q02978 314 aaKnown RBP5.05□□□□□ -1.6
PTCD3-207ENST00000467273 DPYSL3Q14195 570 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 PDK2Q15119 407 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 MAPKAPK3Q16644 382 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 HADHQ16836 314 aaKnown RBP5.05□□□□□ -1.6
PTCD3-207ENST00000467273 BTBD16Q32M84 506 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 GPR33Q49SQ1 333 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 TCP11X2Q5H9J9 407 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 Q5PR19 223 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 WASHC2DQ5SRD0 308 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 GARNL3Q5VVW2 1013 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 SPINK14Q6IE38 97 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 RAB12Q6IQ22 244 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 FIGLAQ6QHK4 219 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 ZDHHC24Q6UX98 284 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 C16orf47Q6ZP98 133 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-207ENST00000467273 RGS9BPQ6ZS82 235 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 RNF44Q7L0R7 432 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 GLT6D1Q7Z4J2 308 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 CPEB2Q7Z5Q1 589 aaKnown RBP5.05□□□□□ -1.6
PTCD3-207ENST00000467273 CCDC71Q8IV32 467 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-207ENST00000467273 P3H2Q8IVL5 708 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 OR5AR1Q8NGP9 310 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 CREB3L4Q8TEY5 395 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 PIGTQ969N2 578 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 TMEM125Q96AQ2 219 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 FAF2Q96CS3 445 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 TMEM41AQ96HV5 264 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 COG8Q96MW5 612 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 COPS8Q99627 209 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 SYT11Q9BT88 431 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 FICDQ9BVA6 458 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 SPATA5L1Q9BVQ7 753 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 RAB11FIP5Q9BXF6 653 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 MS4A7Q9GZW8 240 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-207ENST00000467273 IQCGQ9H095 443 aaKnown RBP5.05□□□□□ -1.6
PTCD3-207ENST00000467273 NCOR1P1Q9H4R4 102 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 ASB8Q9H765 288 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms