RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 OR7G1Q8NGA0 311 aa8.79□□□□□ -1
SDCCAG3-208ENST00000466579 OR5L2Q8NGL0 311 aa8.79□□□□□ -1
SDCCAG3-208ENST00000466579 CPT1CQ8TCG5 803 aa8.79□□□□□ -1
SDCCAG3-208ENST00000466579 ZNF675Q8TD23 568 aa8.79□□□□□ -1
SDCCAG3-208ENST00000466579 ZBTB9Q96C00 473 aa8.79□□□□□ -1
SDCCAG3-208ENST00000466579 KLHL29Q96CT2 875 aa8.79□□□□□ -1
SDCCAG3-208ENST00000466579 SNRNP40Q96DI7 357 aaKnown RBP8.79□□□□□ -1
SDCCAG3-208ENST00000466579 ERP27Q96DN0 273 aa8.79□□□□□ -1
SDCCAG3-208ENST00000466579 ATP6V1G3Q96LB4 118 aa8.79□□□□□ -1
SDCCAG3-208ENST00000466579 C3orf30Q96M34 536 aa8.79□□□□□ -1
SDCCAG3-208ENST00000466579 SIGLEC12Q96PQ1 595 aa8.79□□□□□ -1
SDCCAG3-208ENST00000466579 UTP23Q9BRU9 249 aaKnown RBP8.79□□□□□ -1
SDCCAG3-208ENST00000466579 EBPLQ9BY08 206 aa8.79□□□□□ -1
SDCCAG3-208ENST00000466579 ZNF395Q9H8N7 513 aaPredicted RBP8.79□□□□□ -1
SDCCAG3-208ENST00000466579 SLC35C2Q9NQQ7 365 aa8.79□□□□□ -1
SDCCAG3-208ENST00000466579 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.79□□□□□ -1
SDCCAG3-208ENST00000466579 MAT2BQ9NZL9 334 aa8.79□□□□□ -1
SDCCAG3-208ENST00000466579 COPS7AQ9UBW8 275 aa8.79□□□□□ -1
SDCCAG3-208ENST00000466579 UTS2RQ9UKP6 389 aa8.79□□□□□ -1
SDCCAG3-208ENST00000466579 NTNG1Q9Y2I2 539 aa8.79□□□□□ -1
SDCCAG3-208ENST00000466579 NBASA2RRP1 2371 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 ASPDHA6ND91 283 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 MYO1GB0I1T2 1018 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 KLF11O14901 512 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 ZNF354AO60765 605 aaPredicted RBP8.78□□□□□ -1
SDCCAG3-208ENST00000466579 SLITRK5O94991 958 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 NADKO95544 446 aaPredicted RBP8.78□□□□□ -1
SDCCAG3-208ENST00000466579 HSPA4LO95757 839 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 SDC1P18827 310 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 CYB561P49447 251 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 RPL14P50914 215 aaKnown RBP8.78□□□□□ -1
SDCCAG3-208ENST00000466579 ERVK-8P63133 956 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 C2orf80Q0P641 193 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 BST1Q10588 318 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 DUSP8Q13202 625 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 PDE7AQ13946 482 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 ZNF267Q14586 743 aaPredicted RBP8.78□□□□□ -1
SDCCAG3-208ENST00000466579 EBPQ15125 230 aaKnown RBP8.78□□□□□ -1
SDCCAG3-208ENST00000466579 NR6A1Q15406 480 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 OR1C1Q15619 314 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 PRSS53Q2L4Q9 553 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 PRR30Q53SZ7 412 aaPredicted RBP8.78□□□□□ -1
SDCCAG3-208ENST00000466579 TTMPQ5BVD1 217 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 ZNF628Q5EBL2 1059 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 ZNF766Q5HY98 468 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 LYPD8Q6UX82 237 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 LRRC25Q8N386 305 aaPredicted RBP8.78□□□□□ -1
SDCCAG3-208ENST00000466579 SLC15A4Q8N697 577 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 HORMAD2Q8N7B1 307 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 ANKRD42Q8N9B4 389 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 GALNT11Q8NCW6 608 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 PPP1R14CQ8TAE6 165 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 SUN3Q8TAQ9 357 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 TP53INP1Q96A56 240 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 MARVELD3Q96A59 401 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 PPP3R2Q96LZ3 170 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 TAAR6Q96RI8 345 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 RASL10BQ96S79 203 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.78□□□□□ -11e-6■■■□□ 16.8
SDCCAG3-208ENST00000466579 SH2D2AQ9NP31 389 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 PFDN4Q9NQP4 134 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 ASIC5Q9NY37 505 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 NKIRAS1Q9NYS0 192 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 LUZP4Q9P127 313 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 LRFN1Q9P244 771 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 ERVK-19Q9WJR5 959 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 FIS1Q9Y3D6 152 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 POLR3HQ9Y535 204 aaPredicted RBP8.78□□□□□ -1
SDCCAG3-208ENST00000466579 ZNF780BQ9Y6R6 833 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 RELNP78509 3460 aa8.78□□□□□ -1
SDCCAG3-208ENST00000466579 GCN1Q92616 2671 aaKnown RBP8.77□□□□□ -1
SDCCAG3-208ENST00000466579 EXPH5Q8NEV8 1989 aa8.77□□□□□ -1
SDCCAG3-208ENST00000466579 HMGB1P1B2RPK0 211 aaPredicted RBP8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 NME2P1O60361 137 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 PLOD3O60568 738 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 ERAL1O75616 437 aaKnown RBP8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 SASH3O75995 380 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 OR2J2O76002 312 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 WISP1O95388 367 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 CBX7O95931 251 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 F10P00742 488 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 JUNP05412 331 aaKnown RBP8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 UQCRHP07919 91 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 SP1P08047 785 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 BCKDHAP12694 445 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 CD46P15529 392 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 NME2P22392 152 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 SSTR4P31391 388 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 FEN1P39748 380 aaKnown RBP8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 FRKP42685 505 aaPredicted RBP8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 ASMTP46597 345 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 ALDH9A1P49189 494 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 SSR4P51571 173 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 C21orf58P58505 322 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 RPL38P63173 70 aaKnown RBP8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 OCRLQ01968 901 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 ZNF791Q3KP31 576 aaPredicted RBP8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 C6orf136Q5SQH8 315 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 FHL5Q5TD97 284 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 SPINK14Q6IE38 97 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms