RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 TGFBR3LH3BV60 316 aa8.28□□□□□ -1.08
UBA3-208ENST00000465627 I3L1I5 382 aaPredicted RBP8.28□□□□□ -1.08
UBA3-208ENST00000465627 CLIC1O00299 241 aa8.28□□□□□ -1.08
UBA3-208ENST00000465627 PDPK1O15530 556 aa8.28□□□□□ -1.08
UBA3-208ENST00000465627 ZNF749O43361 778 aa8.28□□□□□ -1.08
UBA3-208ENST00000465627 CHST10O43529 356 aa8.28□□□□□ -1.08
UBA3-208ENST00000465627 RDH16O75452 317 aa8.28□□□□□ -1.08
UBA3-208ENST00000465627 ONECUT2O95948 504 aa8.28□□□□□ -1.08
UBA3-208ENST00000465627 IFI6P09912 130 aa8.28□□□□□ -1.08
UBA3-208ENST00000465627 ZNF10P21506 573 aaPredicted RBP8.28□□□□□ -1.08
UBA3-208ENST00000465627 CDK9P50750 372 aaKnown RBP8.28□□□□□ -1.08
UBA3-208ENST00000465627 RAB38P57729 211 aa8.28□□□□□ -1.08
UBA3-208ENST00000465627 OR4D2P58180 307 aa8.28□□□□□ -1.08
UBA3-208ENST00000465627 OLR1P78380 273 aa8.28□□□□□ -1.08
UBA3-208ENST00000465627 IGLV3-21P80748 117 aaPredicted RBP8.28□□□□□ -1.08
UBA3-208ENST00000465627 TRA2AQ13595 282 aaKnown RBP eCLIP8.28□□□□□ -1.08
UBA3-208ENST00000465627 GRM7Q14831 915 aa8.28□□□□□ -1.08
UBA3-208ENST00000465627 ZNF750Q32MQ0 723 aa8.28□□□□□ -1.08
UBA3-208ENST00000465627 EXOSC6Q5RKV6 272 aaKnown RBP8.28□□□□□ -1.08
UBA3-208ENST00000465627 LCN8Q6JVE9 175 aa8.28□□□□□ -1.08
UBA3-208ENST00000465627 DNAJC14Q6Y2X3 702 aaPredicted RBP8.28□□□□□ -1.08
UBA3-208ENST00000465627 B3GNT8Q7Z7M8 397 aa8.28□□□□□ -1.08
UBA3-208ENST00000465627 PTOV1Q86YD1 416 aa8.28□□□□□ -1.08
UBA3-208ENST00000465627 VPS37AQ8NEZ2 397 aa8.28□□□□□ -1.08
UBA3-208ENST00000465627 ANKRD9Q96BM1 317 aaPredicted RBP8.28□□□□□ -1.08
UBA3-208ENST00000465627 MVB12AQ96EY5 273 aa8.28□□□□□ -1.08
UBA3-208ENST00000465627 DUS3LQ96G46 650 aaKnown RBP8.28□□□□□ -1.08
UBA3-208ENST00000465627 GBP5Q96PP8 586 aa8.28□□□□□ -1.08
UBA3-208ENST00000465627 PANX1Q96RD7 426 aa8.28□□□□□ -1.08
UBA3-208ENST00000465627 DPH2Q9BQC3 489 aaPredicted RBP8.28□□□□□ -1.08
UBA3-208ENST00000465627 PCDHAC1Q9H158 963 aa8.28□□□□□ -1.08
UBA3-208ENST00000465627 ALG2Q9H553 416 aa8.28□□□□□ -1.08
UBA3-208ENST00000465627 COPS7BQ9H9Q2 264 aaPredicted RBP8.28□□□□□ -1.08
UBA3-208ENST00000465627 FGF21Q9NSA1 209 aa8.28□□□□□ -1.08
UBA3-208ENST00000465627 SOHLH2Q9NX45 425 aa8.28□□□□□ -1.08
UBA3-208ENST00000465627 ZNF282Q9UDV7 671 aaPredicted RBP8.28□□□□□ -1.08
UBA3-208ENST00000465627 UTS2RQ9UKP6 389 aa8.28□□□□□ -1.08
UBA3-208ENST00000465627 AP3M1Q9Y2T2 418 aa8.28□□□□□ -1.08
UBA3-208ENST00000465627 PDZD2O15018 2839 aa8.27□□□□□ -1.08
UBA3-208ENST00000465627 TCRBV5S2A0A599 114 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 TCRBV3S1A0A5B6 114 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 A8MU76 341 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 FAM220BPB1ANY3 271 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 TMEM150CB9EJG8 249 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 FAM227AF5H4B4 570 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 H3BNX3 289 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 TNFRSF21O75509 655 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 OR2B3O76000 313 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 DKK1O94907 266 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 C8BP07358 591 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 ATP6V1B2P21281 511 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 CPN2P22792 545 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 BUD31P41223 144 aaPredicted RBP8.27□□□□□ -1.09
UBA3-208ENST00000465627 ALDH9A1P49189 494 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 EFNA3P52797 238 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 ATXN3P54252 364 aaPredicted RBP8.27□□□□□ -1.09
UBA3-208ENST00000465627 ITGA1P56199 1179 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 DAB2P98082 770 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 EEF1A2Q05639 463 aaKnown RBP8.27□□□□□ -1.09
UBA3-208ENST00000465627 ABHD18Q0P651 414 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 MGAT2Q10469 447 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 BNIP2Q12982 314 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 C16orf72Q14CZ0 275 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 NDUFA9Q16795 377 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 SNAP47Q5SQN1 464 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 PRAMEF17Q5VTA0 474 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 YOD1Q5VVQ6 348 aaPredicted RBP8.27□□□□□ -1.09
UBA3-208ENST00000465627 CDCP2Q5VXM1 449 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 SAXO2Q658L1 398 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 ZNF385CQ66K41 422 aaPredicted RBP8.27□□□□□ -1.09
UBA3-208ENST00000465627 OR52E8Q6IFG1 317 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 NIPAL1Q6NVV3 410 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 TLDC1Q6P9B6 456 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 TMEM64Q6YI46 380 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 RNF111Q6ZNA4 994 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 SERPINA11Q86U17 422 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 NAXDQ8IW45 347 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 LINC00528Q8N1L1 170 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 CLEC4FQ8N1N0 589 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 ENDOVQ8N8Q3 282 aaKnown RBP8.27□□□□□ -1.09
UBA3-208ENST00000465627 OR52E4Q8NGH9 312 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 OR4A15Q8NGL6 344 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 RHBDD1Q8TEB9 315 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 EXOSC8Q96B26 276 aaKnown RBP8.27□□□□□ -1.09
UBA3-208ENST00000465627 CCDC124Q96CT7 223 aaKnown RBP8.27□□□□□ -1.09
UBA3-208ENST00000465627 NEURL3Q96EH8 262 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 ZBED6CLQ96FA7 236 aaPredicted RBP8.27□□□□□ -1.09
UBA3-208ENST00000465627 GFM1Q96RP9 751 aaKnown RBP8.27□□□□□ -1.09
UBA3-208ENST00000465627 SH3GL1Q99961 368 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 MUC13Q9H3R2 512 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 SERHL2Q9H4I8 314 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 RPF2Q9H7B2 306 aaKnown RBP8.27□□□□□ -1.09
UBA3-208ENST00000465627 TPT1P8Q9HAU6 139 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 ANKHQ9HCJ1 492 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 NEUROD4Q9HD90 331 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 LANCL2Q9NS86 450 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 CUTCQ9NTM9 273 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 ACTR3BQ9P1U1 418 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 VPS4AQ9UN37 437 aa8.27□□□□□ -1.09
UBA3-208ENST00000465627 CSMD1Q96PZ7 3565 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms