RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 ABI3Q9P2A4 366 aa15.78■□□□□ 0.12
USP39-211ENST00000465282 PTGFRNQ9P2B2 879 aa15.78■□□□□ 0.12
USP39-211ENST00000465282 TP53TG5Q9Y2B4 290 aa15.78■□□□□ 0.12
USP39-211ENST00000465282 CNTRLQ7Z7A1 2325 aa15.77■□□□□ 0.12
USP39-211ENST00000465282 KALRNO60229 2985 aa15.77■□□□□ 0.12
USP39-211ENST00000465282 TRBV11-1A0A0K0K1C0 115 aa15.77■□□□□ 0.12
USP39-211ENST00000465282 GABRR3A8MPY1 467 aa15.77■□□□□ 0.12
USP39-211ENST00000465282 A8MUI8 341 aa15.77■□□□□ 0.12
USP39-211ENST00000465282 TCP11X1B4DZS4 312 aa15.77■□□□□ 0.12
USP39-211ENST00000465282 SCAMP2O15127 329 aaKnown RBP15.77■□□□□ 0.12
USP39-211ENST00000465282 EDF1O60869 148 aaKnown RBP15.77■□□□□ 0.12
USP39-211ENST00000465282 BCAS2O75934 225 aaPredicted RBP15.77■□□□□ 0.12
USP39-211ENST00000465282 G6PDP11413 515 aa15.77■□□□□ 0.12
USP39-211ENST00000465282 MDH1P40925 334 aaKnown RBP15.77■□□□□ 0.12
USP39-211ENST00000465282 RAPSNQ13702 412 aa15.77■□□□□ 0.12
USP39-211ENST00000465282 LY6DQ14210 128 aa15.77■□□□□ 0.12
USP39-211ENST00000465282 ZNF267Q14586 743 aaPredicted RBP15.77■□□□□ 0.12
USP39-211ENST00000465282 PTGR1Q14914 329 aa15.77■□□□□ 0.12
USP39-211ENST00000465282 ACER2Q5QJU3 275 aa15.77■□□□□ 0.12
USP39-211ENST00000465282 DGAT2L6Q6ZPD8 337 aa15.77■□□□□ 0.12
USP39-211ENST00000465282 FAM47EQ6ZV65 393 aa15.77■□□□□ 0.12
USP39-211ENST00000465282 ACAD11Q709F0 780 aa15.77■□□□□ 0.12
USP39-211ENST00000465282 RPS19BP1Q86WX3 136 aaKnown RBP15.77■□□□□ 0.12
USP39-211ENST00000465282 RIMKLAQ8IXN7 391 aa15.77■□□□□ 0.12
USP39-211ENST00000465282 CCDC116Q8IYX3 515 aa15.77■□□□□ 0.12
USP39-211ENST00000465282 VWA5B2Q8N398 1253 aa15.77■□□□□ 0.12
USP39-211ENST00000465282 SIRT6Q8N6T7 355 aa15.77■□□□□ 0.12
USP39-211ENST00000465282 SLC39A7Q92504 469 aa15.77■□□□□ 0.12
USP39-211ENST00000465282 CTHRC1Q96CG8 243 aa15.77■□□□□ 0.12
USP39-211ENST00000465282 CNPPD1Q9BV87 410 aa15.77■□□□□ 0.12
USP39-211ENST00000465282 WDR55Q9H6Y2 383 aaPredicted RBP15.77■□□□□ 0.12
USP39-211ENST00000465282 STMN3Q9NZ72 180 aa15.77■□□□□ 0.12
USP39-211ENST00000465282 SH3BP4Q9P0V3 963 aa15.77■□□□□ 0.12
USP39-211ENST00000465282 CFL2Q9Y281 166 aa15.77■□□□□ 0.12
USP39-211ENST00000465282 A0A1W2PS29 197 aa15.76■□□□□ 0.11
USP39-211ENST00000465282 AKAP10O43572 662 aa15.76■□□□□ 0.11
USP39-211ENST00000465282 LRATO95237 230 aa15.76■□□□□ 0.11
USP39-211ENST00000465282 DIO3P55073 304 aa15.76■□□□□ 0.11
USP39-211ENST00000465282 IRX1P78414 480 aaPredicted RBP15.76■□□□□ 0.11
USP39-211ENST00000465282 ZNF750Q32MQ0 723 aa15.76■□□□□ 0.11
USP39-211ENST00000465282 RNF111Q6ZNA4 994 aa15.76■□□□□ 0.11
USP39-211ENST00000465282 MAVSQ7Z434 540 aa15.76■□□□□ 0.11
USP39-211ENST00000465282 CAMKMTQ7Z624 323 aa15.76■□□□□ 0.11
USP39-211ENST00000465282 KIF2BQ8N4N8 673 aa15.76■□□□□ 0.11
USP39-211ENST00000465282 ZADH2Q8N4Q0 377 aa15.76■□□□□ 0.11
USP39-211ENST00000465282 CLHC1Q8NHS4 586 aa15.76■□□□□ 0.11
USP39-211ENST00000465282 ZFP28Q8NHY6 868 aa15.76■□□□□ 0.11
USP39-211ENST00000465282 NUBPLQ8TB37 319 aa15.76■□□□□ 0.11
USP39-211ENST00000465282 HAS2Q92819 552 aa15.76■□□□□ 0.11
USP39-211ENST00000465282 GFM2Q969S9 779 aaKnown RBP15.76■□□□□ 0.11
USP39-211ENST00000465282 COQ8BQ96D53 544 aa15.76■□□□□ 0.11
USP39-211ENST00000465282 ZBED6CLQ96FA7 236 aaPredicted RBP15.76■□□□□ 0.11
USP39-211ENST00000465282 CCDC28BQ9BUN5 200 aa15.76■□□□□ 0.11
USP39-211ENST00000465282 ACSS1Q9NUB1 689 aaPredicted RBP15.76■□□□□ 0.11
USP39-211ENST00000465282 MAT2BQ9NZL9 334 aa15.76■□□□□ 0.11
USP39-211ENST00000465282 ZNF639Q9UID6 485 aa15.76■□□□□ 0.11
USP39-211ENST00000465282 ZNF223Q9UK11 482 aaPredicted RBP15.76■□□□□ 0.11
USP39-211ENST00000465282 ERVK-19Q9WJR5 959 aa15.76■□□□□ 0.11
USP39-211ENST00000465282 ATRXP46100 2492 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 GOLGA8QA0A0J9YX86 632 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 DYTNA2CJ06 578 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 GOLGA8OA6NCC3 632 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 GOLGA8NF8WBI6 632 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 FCHO1O14526 889 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 POLR3GO15318 223 aaPredicted RBP15.75■□□□□ 0.11
USP39-211ENST00000465282 PDPK1O15530 556 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 DIAPH2O60879 1101 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 IDO1P14902 403 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 FRKP42685 505 aaPredicted RBP15.75■□□□□ 0.11
USP39-211ENST00000465282 CLNS1AP54105 237 aaKnown RBP15.75■□□□□ 0.11
USP39-211ENST00000465282 SLC37A1P57057 533 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 MLF1P58340 268 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 RNF4P78317 190 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 GUCY1A3Q02108 690 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 MGAT2Q10469 447 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 MLC1Q15049 377 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 GSTA3Q16772 222 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 DPY19L1Q2PZI1 675 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 SLC9B1Q4ZJI4 515 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 CPTPQ5TA50 214 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 NXNQ6DKJ4 435 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 SLC29A4Q7RTT9 530 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 SUN3Q8TAQ9 357 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 AMDHD1Q96NU7 426 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 DPY30Q9C005 99 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 BRINP2Q9C0B6 783 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 CDCP1Q9H5V8 836 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 ZNF71Q9NQZ8 489 aaPredicted RBP15.75■□□□□ 0.11
USP39-211ENST00000465282 AIG1Q9NVV5 245 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 MYOTQ9UBF9 498 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 YARS2Q9Y2Z4 477 aaKnown RBP15.75■□□□□ 0.11
USP39-211ENST00000465282 COL6A6A6NMZ7 2263 aa15.75■□□□□ 0.11
USP39-211ENST00000465282 A0A087WV62 115 aa15.74■□□□□ 0.11
USP39-211ENST00000465282 PLOD2O00469 737 aa15.74■□□□□ 0.11
USP39-211ENST00000465282 PLOD3O60568 738 aa15.74■□□□□ 0.11
USP39-211ENST00000465282 PDGFAP04085 211 aa15.74■□□□□ 0.11
USP39-211ENST00000465282 S1PR1P21453 382 aa15.74■□□□□ 0.11
USP39-211ENST00000465282 IDH3AP50213 366 aa15.74■□□□□ 0.11
USP39-211ENST00000465282 NCBP2P52298 156 aaKnown RBP eCLIP15.74■□□□□ 0.113e-6■■□□□ 12.2
USP39-211ENST00000465282 AQP5P55064 265 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms