RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 RNF212BA8MTL3 300 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 E9PQ18 207 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 SH2D1BO14796 132 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 CFLARO15519 480 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 OR6B1O95007 311 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 PDGFBP01127 241 aaPredicted RBP3□□□□□ -1.93
HMGXB4-205ENST00000464480 CGAP01215 116 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 PROS1P07225 676 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 GSTA1P08263 222 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 RALAP11233 206 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 ARF4P18085 180 aaPredicted RBP3□□□□□ -1.93
HMGXB4-205ENST00000464480 LMO2P25791 158 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 TMOD1P28289 359 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 SPRP35270 261 aaPredicted RBP3□□□□□ -1.93
HMGXB4-205ENST00000464480 SSR1P43307 286 aaKnown RBP3□□□□□ -1.93
HMGXB4-205ENST00000464480 MAGEA4P43358 317 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 TKTL1P51854 596 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 ATXN3P54252 364 aaPredicted RBP3□□□□□ -1.93
HMGXB4-205ENST00000464480 RPS4XP62701 263 aaKnown RBP3□□□□□ -1.93
HMGXB4-205ENST00000464480 GSTO1P78417 241 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 PAX8Q06710 450 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 BTG3Q14201 252 aaPredicted RBP3□□□□□ -1.93
HMGXB4-205ENST00000464480 EMC2Q15006 297 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 HSP90AB3PQ58FF7 597 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 IL23RQ5VWK5 629 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 OR6B2Q6IFH4 312 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 RBM43Q6ZSC3 357 aaKnown RBP3□□□□□ -1.93
HMGXB4-205ENST00000464480 TMUB2Q71RG4 321 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 YRDCQ86U90 279 aaKnown RBP3□□□□□ -1.93
HMGXB4-205ENST00000464480 RPAINQ86UA6 219 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 ZSCAN30Q86W11 494 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 LRRC17Q8N6Y2 441 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 CHDHQ8NE62 594 aaPredicted RBP3□□□□□ -1.93
HMGXB4-205ENST00000464480 SSC4DQ8WTU2 575 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 PNPLA2Q96AD5 504 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 TMEM45BQ96B21 275 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 FAM111AQ96PZ2 611 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 HEXA-AS1Q9H8Q6 139 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 TUBGCP4Q9UGJ1 667 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 CIDEBQ9UHD4 219 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 PLA2G4CQ9UP65 541 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 PIN4Q9Y237 131 aaKnown RBP3□□□□□ -1.93
HMGXB4-205ENST00000464480 SLC6A5Q9Y345 797 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 FGD5Q6ZNL6 1462 aa3□□□□□ -1.93
HMGXB4-205ENST00000464480 KIF7Q2M1P5 1343 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 RASGRF2O14827 1237 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 BUB1O43683 1085 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 PRPSAP2O60256 369 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 FRAT2O75474 233 aaPredicted RBP2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 STAM2O75886 525 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 GAS8-AS1O95177 125 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 FCGR3AP08637 254 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 ETS1P14921 441 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 FOSL2P15408 326 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 MATKP42679 507 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 SLC1A4P43007 532 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 ASMTP46597 345 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 NPY2RP49146 381 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 ZNF131P52739 623 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 MYBPC1Q00872 1141 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 IL1RL1Q01638 556 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 ACY1Q03154 408 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 SNX1Q13596 522 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 SIX1Q15475 284 aaPredicted RBP2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 HKDC1Q2TB90 917 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 UNC50Q53HI1 259 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 RHBDD2Q6NTF9 364 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 ELMOD2Q8IZ81 293 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 PYROXD2Q8N2H3 581 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 ABHD12Q8N2K0 398 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 Q8N377 158 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 RELL2Q8NC24 303 aaPredicted RBP2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 ANKRD20A12PQ8NF67 263 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 OR4F5Q8NH21 305 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 TMEM37Q8WXS4 190 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 PHYHIPQ92561 330 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 P3H4Q92791 437 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 TAF15Q92804 592 aaKnown RBP eCLIP2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 C14orf79Q96F83 325 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 CAPNS2Q96L46 248 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 ACCSQ96QU6 501 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 KCNK16Q96T55 309 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 HSD17B14Q9BPX1 270 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 C19orf43Q9BQ61 176 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 CBWD1Q9BRT8 395 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 LRRCC1Q9C099 1032 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 FAM124BQ9H5Z6 455 aaPredicted RBP2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 TMEM231Q9H6L2 316 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 DCTPP1Q9H773 170 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 Q9HAA7 133 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 ELL3Q9HB65 397 aaPredicted RBP2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 NINJ2Q9NZG7 142 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 MIOXQ9UGB7 285 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 SPATA2Q9UM82 520 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 SLC9A8Q9Y2E8 581 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 ZNF175Q9Y473 711 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 CPQQ9Y646 472 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 NPC1L1Q9UHC9 1359 aa2.99□□□□□ -1.93
HMGXB4-205ENST00000464480 A0A1B0GTH9 108 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms