RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 NGBQ9NPG2 151 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 HPS4Q9NQG7 708 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 DEPPQ9NTK1 212 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 ERVK-18Q9QC07 812 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 ZNF346Q9UL40 294 aaKnown RBP3.87□□□□□ -1.79
USP25-207ENST00000464435 NIP7Q9Y221 180 aaKnown RBP eCLIP3.87□□□□□ -1.79
USP25-207ENST00000464435 SLC6A5Q9Y345 797 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 NEDD8-MDP1E9PL57 170 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 TRAFD1O14545 582 aaPredicted RBP3.86□□□□□ -1.79
USP25-207ENST00000464435 TDO2P48775 406 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 NPY2RP49146 381 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 NDUFV3P56181 108 aaKnown RBP3.86□□□□□ -1.79
USP25-207ENST00000464435 SLC26A5P58743 744 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 GMFBP60983 142 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 KLHL30Q0D2K2 578 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 BTG3Q14201 252 aaPredicted RBP3.86□□□□□ -1.79
USP25-207ENST00000464435 ZNF146Q15072 292 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 ZKSCAN8Q15776 578 aaPredicted RBP3.86□□□□□ -1.79
USP25-207ENST00000464435 ANKDD1AQ495B1 522 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 C2CD6Q53TS8 623 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 HSP90AA5PQ58FG0 334 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 C1orf189Q5VU69 101 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 ZNF613Q6PF04 617 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 OLFM4Q6UX06 510 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 RBM43Q6ZSC3 357 aaKnown RBP3.86□□□□□ -1.79
USP25-207ENST00000464435 CDHR3Q6ZTQ4 885 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 FAM131BQ86XD5 332 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 GVQW1Q8N7I0 195 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 ZNRF1Q8ND25 227 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 OR1K1Q8NGR3 316 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 RDH11Q8TC12 318 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 PHYHIPQ92561 330 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 MOCOSQ96EN8 888 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 ACCSQ96QU6 501 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 KCNK16Q96T55 309 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 CBWD1Q9BRT8 395 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 MCRIP2Q9BUT9 160 aaKnown RBP3.86□□□□□ -1.79
USP25-207ENST00000464435 NLNQ9BYT8 704 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 TMEM231Q9H6L2 316 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 HOMER3Q9NSC5 361 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 ZDHHC18Q9NUE0 388 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 CNOT2Q9NZN8 540 aaKnown RBP3.86□□□□□ -1.79
USP25-207ENST00000464435 VPS54Q9P1Q0 977 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 ENTPD4Q9Y227 616 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 AP1M2Q9Y6Q5 423 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 ZMYM6O95789 1325 aa3.86□□□□□ -1.79
USP25-207ENST00000464435 TDRD15B5MCY1 1934 aaKnown RBP3.85□□□□□ -1.79
USP25-207ENST00000464435 SYNJ2BP-COX16A0A087WUM0 186 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 TRGV8A0A0C4DH27 118 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 NDUFAF8A1L188 74 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 EPM2AB3EWF7 344 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 RASGRF2O14827 1237 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 NOL3O60936 208 aaKnown RBP3.85□□□□□ -1.79
USP25-207ENST00000464435 FCER2P06734 321 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 HIST1H2AGP0C0S8 130 aaPredicted RBP3.85□□□□□ -1.79
USP25-207ENST00000464435 MBL2P11226 248 aaPredicted RBP3.85□□□□□ -1.79
USP25-207ENST00000464435 DPEP1P16444 411 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 RPL9P32969 192 aaKnown RBP3.85□□□□□ -1.79
USP25-207ENST00000464435 PRPHP41219 470 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 ATP4BP51164 291 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 FUT7Q11130 342 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 SIX1Q15475 284 aaPredicted RBP3.85□□□□□ -1.79
USP25-207ENST00000464435 MS4A18Q3C1V0 323 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 UNC50Q53HI1 259 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 WDR25Q64LD2 544 aaPredicted RBP3.85□□□□□ -1.79
USP25-207ENST00000464435 MYPOPQ86VE0 399 aaPredicted RBP3.85□□□□□ -1.79
USP25-207ENST00000464435 AMZ2Q86W34 360 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 KRTAP7-1Q8IUC3 87 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.85□□□□□ -1.79
USP25-207ENST00000464435 LINC00518Q8N0U6 118 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 RNF148Q8N7C7 305 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 MINDY2Q8NBR6 621 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 ICA1LQ8NDH6 482 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 CHPT1Q8WUD6 406 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 GTF3AQ92664 365 aaKnown RBP3.85□□□□□ -1.79
USP25-207ENST00000464435 HIST1H2ACQ93077 130 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 VPS39Q96JC1 886 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 LINC00479Q96M42 142 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 CCDC28BQ9BUN5 200 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 LIN28AQ9H9Z2 209 aaKnown RBP3.85□□□□□ -1.79
USP25-207ENST00000464435 DCAF16Q9NXF7 216 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 LHX3Q9UBR4 397 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 MIOXQ9UGB7 285 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 DUSP12Q9UNI6 340 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 KLF2Q9Y5W3 355 aaPredicted RBP3.85□□□□□ -1.79
USP25-207ENST00000464435 PRSS21Q9Y6M0 314 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 UBE4BO95155 1302 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 FGD5Q6ZNL6 1462 aa3.85□□□□□ -1.79
USP25-207ENST00000464435 IGLV4-3A0A075B6K6 122 aa3.84□□□□□ -1.79
USP25-207ENST00000464435 A0A1B0GU03 582 aa3.84□□□□□ -1.79
USP25-207ENST00000464435 RGSL1A5PLK6 1076 aa3.84□□□□□ -1.79
USP25-207ENST00000464435 IGLON5A6NGN9 336 aa3.84□□□□□ -1.79
USP25-207ENST00000464435 TSPAN2O60636 221 aa3.84□□□□□ -1.79
USP25-207ENST00000464435 IGHG3P01860 377 aa3.84□□□□□ -1.79
USP25-207ENST00000464435 HEXBP07686 556 aa3.84□□□□□ -1.79
USP25-207ENST00000464435 OR9G9P0C7N8 305 aa3.84□□□□□ -1.79
USP25-207ENST00000464435 MAT2AP31153 395 aaKnown RBP3.84□□□□□ -1.79
USP25-207ENST00000464435 PRDX2P32119 198 aa3.84□□□□□ -1.79
USP25-207ENST00000464435 TAF6P49848 677 aa3.84□□□□□ -1.79
USP25-207ENST00000464435 GPC3P51654 580 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms