RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 IL5RAQ01344 420 aa13.71□□□□□ -0.22
COL5A1-205ENST00000464187 RELAQ04206 551 aa13.71□□□□□ -0.22
COL5A1-205ENST00000464187 PIGFQ07326 219 aa13.71□□□□□ -0.22
COL5A1-205ENST00000464187 TMEM35AQ53FP2 167 aa13.71□□□□□ -0.22
COL5A1-205ENST00000464187 NKAIN2Q5VXU1 208 aa13.71□□□□□ -0.22
COL5A1-205ENST00000464187 PAGE2Q7Z2X7 111 aa13.71□□□□□ -0.22
COL5A1-205ENST00000464187 UBE3DQ7Z6J8 389 aa13.71□□□□□ -0.22
COL5A1-205ENST00000464187 SETD9Q8NE22 299 aa13.71□□□□□ -0.22
COL5A1-205ENST00000464187 SPPL2AQ8TCT8 520 aa13.71□□□□□ -0.22
COL5A1-205ENST00000464187 RGMAQ96B86 450 aa13.71□□□□□ -0.22
COL5A1-205ENST00000464187 CNDP2Q96KP4 475 aaKnown RBP13.71□□□□□ -0.22
COL5A1-205ENST00000464187 MAP3K3Q99759 626 aa13.71□□□□□ -0.22
COL5A1-205ENST00000464187 C17orf62Q9BQA9 187 aa13.71□□□□□ -0.22
COL5A1-205ENST00000464187 SMOC1Q9H4F8 434 aa13.71□□□□□ -0.22
COL5A1-205ENST00000464187 KLHL31Q9H511 634 aa13.71□□□□□ -0.22
COL5A1-205ENST00000464187 TIMMDC1Q9NPL8 285 aa13.71□□□□□ -0.22
COL5A1-205ENST00000464187 KRT84Q9NSB2 600 aa13.71□□□□□ -0.22
COL5A1-205ENST00000464187 NDUFAF4Q9P032 175 aa13.71□□□□□ -0.22
COL5A1-205ENST00000464187 NAALAD2Q9Y3Q0 740 aa13.71□□□□□ -0.22
COL5A1-205ENST00000464187 HEMK1Q9Y5R4 338 aaPredicted RBP13.71□□□□□ -0.22
COL5A1-205ENST00000464187 R4GN57 208 aa13.71□□□□□ -0.22
COL5A1-205ENST00000464187 NINQ8N4C6 2090 aa13.7□□□□□ -0.22
COL5A1-205ENST00000464187 ATE1O95260 518 aa13.7□□□□□ -0.22
COL5A1-205ENST00000464187 SYPP08247 313 aa13.7□□□□□ -0.22
COL5A1-205ENST00000464187 GPR3P46089 330 aa13.7□□□□□ -0.22
COL5A1-205ENST00000464187 PRIM2P49643 509 aa13.7□□□□□ -0.22
COL5A1-205ENST00000464187 PCBP3P57721 371 aaKnown RBP13.7□□□□□ -0.22
COL5A1-205ENST00000464187 CDK6Q00534 326 aa13.7□□□□□ -0.22
COL5A1-205ENST00000464187 ELOAQ14241 798 aaKnown RBP13.7□□□□□ -0.22
COL5A1-205ENST00000464187 IFI44LQ53G44 452 aa13.7□□□□□ -0.22
COL5A1-205ENST00000464187 FRMPD2BQ6IN97 320 aa13.7□□□□□ -0.22
COL5A1-205ENST00000464187 FAM92BQ6ZTR7 304 aa13.7□□□□□ -0.22
COL5A1-205ENST00000464187 ASPGQ86U10 573 aa13.7□□□□□ -0.22
COL5A1-205ENST00000464187 TTC29Q8NA56 475 aaPredicted RBP13.7□□□□□ -0.22
COL5A1-205ENST00000464187 ATG16L2Q8NAA4 619 aa13.7□□□□□ -0.22
COL5A1-205ENST00000464187 MS4A6EQ96DS6 147 aa13.7□□□□□ -0.22
COL5A1-205ENST00000464187 AHCYL2Q96HN2 611 aaKnown RBP13.7□□□□□ -0.22
COL5A1-205ENST00000464187 ARRDC1-AS1Q9H2J1 176 aa13.7□□□□□ -0.22
COL5A1-205ENST00000464187 IGHV1OR21-1A0A087WYE8 117 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 A0A0G2JN53 185 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 PRAMEF25A6NGN4 478 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 E9PQ18 207 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 TMX2-CTNND1H3BSU7 103 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 PDPK1O15530 556 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 ERI3O43414 337 aaKnown RBP13.69□□□□□ -0.22
COL5A1-205ENST00000464187 TMPRSS11DO60235 418 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 SH3BP5O60239 455 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 CCDC159P0C7I6 412 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 SLC35G6P0C7Q6 338 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 MATN1P21941 496 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 EPHA2P29317 976 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 ALDH9A1P49189 494 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 RPS6KA3P51812 740 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 GFERP55789 205 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 ZNF630Q2M218 657 aaPredicted RBP13.69□□□□□ -0.22
COL5A1-205ENST00000464187 CRB2Q5IJ48 1285 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 GTF2IRD2BQ6EKJ0 949 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 LAIR1Q6GTX8 287 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 OR4C11Q6IEV9 310 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 RNF44Q7L0R7 432 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 B3GNT8Q7Z7M8 397 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 GTF2IRD2Q86UP8 949 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 NUDT13Q86X67 352 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 ZC3H7AQ8IWR0 971 aaKnown RBP13.69□□□□□ -0.22
COL5A1-205ENST00000464187 C19orf47Q8N9M1 422 aaKnown RBP13.69□□□□□ -0.22
COL5A1-205ENST00000464187 BPIFB6Q8NFQ5 453 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 OR2L5Q8NG80 312 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 OR5P2Q8WZ92 322 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 THAP11Q96EK4 314 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 LOXL4Q96JB6 756 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 TGM7Q96PF1 710 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 TEFMQ96QE5 360 aaKnown RBP13.69□□□□□ -0.22
COL5A1-205ENST00000464187 GTPBP2Q9BX10 602 aaKnown RBP13.69□□□□□ -0.22
COL5A1-205ENST00000464187 NLNQ9BYT8 704 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 LHPPQ9H008 270 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 RAB33BQ9H082 229 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 RUBCNLQ9H714 662 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 FAM60AQ9NP50 221 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 TMEM9Q9P0T7 183 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 C5AR2Q9P296 337 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 EPHA6Q9UF33 1036 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 NDRG4Q9ULP0 352 aaKnown RBP13.69□□□□□ -0.22
COL5A1-205ENST00000464187 WBP11Q9Y2W2 641 aaKnown RBP13.69□□□□□ -0.22
COL5A1-205ENST00000464187 TESMINQ9Y4I5 508 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 GMPPBQ9Y5P6 360 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 SNX8Q9Y5X2 465 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 LYVE1Q9Y5Y7 322 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 HSPE1-MOB4S4R3N1 261 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 ARID1BQ8NFD5 2236 aaPredicted RBP13.69□□□□□ -0.22
COL5A1-205ENST00000464187 LOC105369274A0A096LPK9 316 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 LOC102723532A0A0G2JNH3 316 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 A0A1B0GVG6 124 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 TRIM64BA6NI03 449 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 SLC9B1P1A6NJY1 282 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 C4orf51C9J302 202 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 M0QX08 132 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 SIGLEC6O43699 453 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 XPNPEP2O43895 674 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 ANGPTL1O95841 491 aa13.69□□□□□ -0.22
COL5A1-205ENST00000464187 CDK4P11802 303 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms