RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 DCAF7P61962 342 aa15.82■□□□□ 0.12
HMGN1-210ENST00000464078 ZNF267Q14586 743 aaPredicted RBP15.82■□□□□ 0.12
HMGN1-210ENST00000464078 FBXW10Q5XX13 1052 aa15.82■□□□□ 0.12
HMGN1-210ENST00000464078 C18orf63Q68DL7 685 aa15.82■□□□□ 0.12
HMGN1-210ENST00000464078 GRHL2Q6ISB3 625 aa15.82■□□□□ 0.12
HMGN1-210ENST00000464078 SLC35F6Q8N357 371 aa15.82■□□□□ 0.12
HMGN1-210ENST00000464078 RIT1Q92963 219 aa15.82■□□□□ 0.12
HMGN1-210ENST00000464078 TP53INP1Q96A56 240 aa15.82■□□□□ 0.12
HMGN1-210ENST00000464078 RGMAQ96B86 450 aa15.82■□□□□ 0.12
HMGN1-210ENST00000464078 NTNG2Q96CW9 530 aa15.82■□□□□ 0.12
HMGN1-210ENST00000464078 RILPQ96NA2 401 aa15.82■□□□□ 0.12
HMGN1-210ENST00000464078 CENPKQ9BS16 269 aa15.82■□□□□ 0.12
HMGN1-210ENST00000464078 SORBS1Q9BX66 1292 aaKnown RBP15.82■□□□□ 0.12
HMGN1-210ENST00000464078 ZNF717Q9BY31 904 aaPredicted RBP15.82■□□□□ 0.12
HMGN1-210ENST00000464078 ANGPTL4Q9BY76 406 aa15.82■□□□□ 0.12
HMGN1-210ENST00000464078 OR51B5Q9H339 312 aa15.82■□□□□ 0.12
HMGN1-210ENST00000464078 NEUROD4Q9HD90 331 aa15.82■□□□□ 0.12
HMGN1-210ENST00000464078 SMYD2Q9NRG4 433 aa15.82■□□□□ 0.12
HMGN1-210ENST00000464078 SNX15Q9NRS6 342 aa15.82■□□□□ 0.12
HMGN1-210ENST00000464078 BEX4Q9NWD9 120 aaPredicted RBP15.82■□□□□ 0.12
HMGN1-210ENST00000464078 RNF112Q9ULX5 631 aa15.82■□□□□ 0.12
HMGN1-210ENST00000464078 ATRQ13535 2644 aa15.82■□□□□ 0.12
HMGN1-210ENST00000464078 COL6A5A8TX70 2615 aa15.81■□□□□ 0.12
HMGN1-210ENST00000464078 A0A1B0GTL3 188 aa15.81■□□□□ 0.12
HMGN1-210ENST00000464078 SAP18O00422 153 aaKnown RBP15.81■□□□□ 0.12
HMGN1-210ENST00000464078 OR10H2O60403 315 aa15.81■□□□□ 0.12
HMGN1-210ENST00000464078 SH3BGRLO75368 114 aa15.81■□□□□ 0.12
HMGN1-210ENST00000464078 INHBBP09529 407 aa15.81■□□□□ 0.12
HMGN1-210ENST00000464078 CTSSP25774 331 aa15.81■□□□□ 0.12
HMGN1-210ENST00000464078 RAP1GDS1P52306 607 aa15.81■□□□□ 0.12
HMGN1-210ENST00000464078 DR1Q01658 176 aa15.81■□□□□ 0.12
HMGN1-210ENST00000464078 MRM1Q6IN84 353 aaKnown RBP15.81■□□□□ 0.12
HMGN1-210ENST00000464078 HUS1BQ8NHY5 278 aa15.81■□□□□ 0.12
HMGN1-210ENST00000464078 SPPL2AQ8TCT8 520 aa15.81■□□□□ 0.12
HMGN1-210ENST00000464078 ARSGQ96EG1 525 aa15.81■□□□□ 0.12
HMGN1-210ENST00000464078 RBBP8Q99708 897 aa15.81■□□□□ 0.12
HMGN1-210ENST00000464078 UGT2B28Q9BY64 529 aa15.81■□□□□ 0.12
HMGN1-210ENST00000464078 CALHM2Q9HA72 323 aa15.81■□□□□ 0.12
HMGN1-210ENST00000464078 LYARQ9NX58 379 aaKnown RBP15.81■□□□□ 0.12
HMGN1-210ENST00000464078 NUDT4Q9NZJ9 180 aa15.81■□□□□ 0.12
HMGN1-210ENST00000464078 FETUBQ9UGM5 382 aa15.81■□□□□ 0.12
HMGN1-210ENST00000464078 STAB1Q9NY15 2570 aa15.81■□□□□ 0.12
HMGN1-210ENST00000464078 CSPG4Q6UVK1 2322 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 C2orf92A0A1B0GVN3 265 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 EEF1E1-BLOC1S5C9J1V9 151 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 K7EPI3 171 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 EEF1E1O43324 174 aaKnown RBP15.8■□□□□ 0.12
HMGN1-210ENST00000464078 PRKRAO75569 313 aaKnown RBP15.8■□□□□ 0.12
HMGN1-210ENST00000464078 TRAPPC6AO75865 159 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 HRGP04196 525 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 SLC35E2BP0CK96 405 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 SLC35E2P0CK97 266 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 NR2F6P10588 404 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 BMP7P18075 431 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 CD53P19397 219 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 FBXW4P57775 412 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 PCBP2Q15366 365 aaKnown RBP eCLIP15.8■□□□□ 0.12
HMGN1-210ENST00000464078 DCST1Q5T197 706 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 BICRALQ6AI39 1079 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 PACS2Q86VP3 889 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 C17orf47Q8NEP4 570 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 LINC01560Q8TB33 94 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 SMPDL3BQ92485 455 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 WDYHV1Q96HA8 205 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 TMEM41AQ96HV5 264 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 ZFP3Q96NJ6 502 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 DACH2Q96NX9 599 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 CPNE1Q99829 537 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 SMR3AQ99954 134 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 TEX10Q9NXF1 929 aaPredicted RBP15.8■□□□□ 0.12
HMGN1-210ENST00000464078 OPTCQ9UBM4 332 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 CAMK2AQ9UQM7 478 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 SLC6A5Q9Y345 797 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 ASB4Q9Y574 426 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 NPFFR2Q9Y5X5 522 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 ARID1AO14497 2285 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 MED12Q93074 2177 aa15.8■□□□□ 0.12
HMGN1-210ENST00000464078 A0A0A6YYD5 115 aa15.79■□□□□ 0.12
HMGN1-210ENST00000464078 CDH16O75309 829 aa15.79■□□□□ 0.12
HMGN1-210ENST00000464078 PIAS1O75925 651 aa15.79■□□□□ 0.12
HMGN1-210ENST00000464078 HEXAP06865 529 aa15.79■□□□□ 0.12
HMGN1-210ENST00000464078 TCP1P17987 556 aaKnown RBP15.79■□□□□ 0.12
HMGN1-210ENST00000464078 ADSLP30566 484 aaPredicted RBP15.79■□□□□ 0.12
HMGN1-210ENST00000464078 MASP1P48740 699 aa15.79■□□□□ 0.12
HMGN1-210ENST00000464078 RAB10P61026 200 aa15.79■□□□□ 0.12
HMGN1-210ENST00000464078 RPP38P78345 283 aaKnown RBP15.79■□□□□ 0.12
HMGN1-210ENST00000464078 SHEQ5VZ18 495 aa15.79■□□□□ 0.12
HMGN1-210ENST00000464078 TMEM64Q6YI46 380 aa15.79■□□□□ 0.12
HMGN1-210ENST00000464078 ZBED8Q8IZ13 594 aa15.79■□□□□ 0.12
HMGN1-210ENST00000464078 STAG3L4Q8TBR4 150 aa15.79■□□□□ 0.12
HMGN1-210ENST00000464078 ZPLD1Q8TCW7 415 aa15.79■□□□□ 0.12
HMGN1-210ENST00000464078 CDKL2Q92772 493 aa15.79■□□□□ 0.12
HMGN1-210ENST00000464078 EXT2Q93063 718 aa15.79■□□□□ 0.12
HMGN1-210ENST00000464078 GNRHR2Q96P88 292 aa15.79■□□□□ 0.12
HMGN1-210ENST00000464078 TRIB1Q96RU8 372 aa15.79■□□□□ 0.12
HMGN1-210ENST00000464078 ATOH8Q96SQ7 321 aa15.79■□□□□ 0.12
HMGN1-210ENST00000464078 YIPF4Q9BSR8 244 aa15.79■□□□□ 0.12
HMGN1-210ENST00000464078 DDX31Q9H8H2 851 aaKnown RBP15.79■□□□□ 0.12
HMGN1-210ENST00000464078 CXorf21Q9HAI6 301 aa15.79■□□□□ 0.12
HMGN1-210ENST00000464078 TXNDC16Q9P2K2 825 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms