RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SUN3Q8TAQ9 357 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 CTHRC1Q96CG8 243 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 KLHL29Q96CT2 875 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 SCMH1Q96GD3 660 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 ATP6V1G3Q96LB4 118 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 TAAR6Q96RI8 345 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 UTP23Q9BRU9 249 aaKnown RBP16.41■□□□□ 0.22
VPS52-214ENST00000463486 HES7Q9BYE0 225 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 ASF1BQ9NVP2 202 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 EHD3Q9NZN3 535 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 UTS2RQ9UKP6 389 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 ERVK-19Q9WJR5 959 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 WBP11Q9Y2W2 641 aaKnown RBP16.41■□□□□ 0.22
VPS52-214ENST00000463486 RAP2CQ9Y3L5 183 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 PCDHGB6Q9Y5F9 930 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 USP9XQ93008 2570 aaPredicted RBP16.41■□□□□ 0.22
VPS52-214ENST00000463486 SNNO75324 88 aaPredicted RBP16.4■□□□□ 0.22
VPS52-214ENST00000463486 ERAL1O75616 437 aaKnown RBP16.4■□□□□ 0.22
VPS52-214ENST00000463486 OR2J2O76002 312 aa16.4■□□□□ 0.22
VPS52-214ENST00000463486 HSPA4LO95757 839 aa16.4■□□□□ 0.22
VPS52-214ENST00000463486 UQCRHP07919 91 aa16.4■□□□□ 0.22
VPS52-214ENST00000463486 SDC1P18827 310 aa16.4■□□□□ 0.22
VPS52-214ENST00000463486 SSTR4P31391 388 aa16.4■□□□□ 0.22
VPS52-214ENST00000463486 ALDH9A1P49189 494 aa16.4■□□□□ 0.22
VPS52-214ENST00000463486 C2orf80Q0P641 193 aa16.4■□□□□ 0.22
VPS52-214ENST00000463486 NR6A1Q15406 480 aa16.4■□□□□ 0.22
VPS52-214ENST00000463486 OR1C1Q15619 314 aa16.4■□□□□ 0.22
VPS52-214ENST00000463486 FAM111BQ6SJ93 734 aa16.4■□□□□ 0.22
VPS52-214ENST00000463486 GALNT12Q8IXK2 581 aa16.4■□□□□ 0.22
VPS52-214ENST00000463486 DDIASQ8IXT1 998 aa16.4■□□□□ 0.22
VPS52-214ENST00000463486 ZNF441Q8N8Z8 693 aa16.4■□□□□ 0.22
VPS52-214ENST00000463486 PPP1R14CQ8TAE6 165 aa16.4■□□□□ 0.22
VPS52-214ENST00000463486 NUBPLQ8TB37 319 aa16.4■□□□□ 0.22
VPS52-214ENST00000463486 PAIP2Q9BPZ3 127 aaKnown RBP16.4■□□□□ 0.22
VPS52-214ENST00000463486 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.4■□□□□ 0.22
VPS52-214ENST00000463486 SLC35C2Q9NQQ7 365 aa16.4■□□□□ 0.22
VPS52-214ENST00000463486 ARGLU1Q9NWB6 273 aaPredicted RBP16.4■□□□□ 0.22
VPS52-214ENST00000463486 MAT2BQ9NZL9 334 aa16.4■□□□□ 0.22
VPS52-214ENST00000463486 PSME2Q9UL46 239 aa16.4■□□□□ 0.22
VPS52-214ENST00000463486 YARS2Q9Y2Z4 477 aaKnown RBP16.4■□□□□ 0.22
VPS52-214ENST00000463486 LRRK2Q5S007 2527 aa16.39■□□□□ 0.21
VPS52-214ENST00000463486 ATP6AP2A0A1C7CYW4 349 aa16.39■□□□□ 0.21
VPS52-214ENST00000463486 MYO1GB0I1T2 1018 aa16.39■□□□□ 0.21
VPS52-214ENST00000463486 WWP2O00308 870 aa16.39■□□□□ 0.21
VPS52-214ENST00000463486 ATP6AP2O75787 350 aa16.39■□□□□ 0.21
VPS52-214ENST00000463486 SNUPNO95149 360 aaKnown RBP16.39■□□□□ 0.21
VPS52-214ENST00000463486 NADKO95544 446 aaPredicted RBP16.39■□□□□ 0.21
VPS52-214ENST00000463486 STX3Q13277 289 aa16.39■□□□□ 0.21
VPS52-214ENST00000463486 EBPQ15125 230 aaKnown RBP16.39■□□□□ 0.21
VPS52-214ENST00000463486 LTB4RQ15722 352 aa16.39■□□□□ 0.21
VPS52-214ENST00000463486 MPEG1Q2M385 716 aa16.39■□□□□ 0.21
VPS52-214ENST00000463486 PIGGQ5H8A4 983 aa16.39■□□□□ 0.21
VPS52-214ENST00000463486 C6orf136Q5SQH8 315 aa16.39■□□□□ 0.21
VPS52-214ENST00000463486 ZNF324BQ6AW86 544 aaPredicted RBP16.39■□□□□ 0.21
VPS52-214ENST00000463486 IKBIPQ70UQ0 350 aa16.39■□□□□ 0.21
VPS52-214ENST00000463486 TICAM1Q8IUC6 712 aa16.39■□□□□ 0.21
VPS52-214ENST00000463486 MGARPQ8TDB4 240 aa16.39■□□□□ 0.21
VPS52-214ENST00000463486 EXOSC8Q96B26 276 aaKnown RBP16.39■□□□□ 0.21
VPS52-214ENST00000463486 ART5Q96L15 291 aa16.39■□□□□ 0.21
VPS52-214ENST00000463486 RASL10BQ96S79 203 aa16.39■□□□□ 0.21
VPS52-214ENST00000463486 CCT7Q99832 543 aa16.39■□□□□ 0.21
VPS52-214ENST00000463486 CNPPD1Q9BV87 410 aa16.39■□□□□ 0.21
VPS52-214ENST00000463486 LRFN1Q9P244 771 aa16.39■□□□□ 0.21
VPS52-214ENST00000463486 ABI3Q9P2A4 366 aa16.39■□□□□ 0.21
VPS52-214ENST00000463486 COPS7AQ9UBW8 275 aa16.39■□□□□ 0.21
VPS52-214ENST00000463486 BAIAP2L1Q9UHR4 511 aa16.39■□□□□ 0.21
VPS52-214ENST00000463486 TMED5Q9Y3A6 229 aa16.39■□□□□ 0.21
VPS52-214ENST00000463486 COPG1Q9Y678 874 aaKnown RBP16.39■□□□□ 0.21
VPS52-214ENST00000463486 POLEQ07864 2286 aa16.39■□□□□ 0.21
VPS52-214ENST00000463486 CROCCQ5TZA2 2017 aa16.38■□□□□ 0.21
VPS52-214ENST00000463486 SKAP2O75563 359 aaPredicted RBP16.38■□□□□ 0.21
VPS52-214ENST00000463486 OR6B1O95007 311 aa16.38■□□□□ 0.21
VPS52-214ENST00000463486 CBX7O95931 251 aa16.38■□□□□ 0.21
VPS52-214ENST00000463486 BCKDHAP12694 445 aa16.38■□□□□ 0.21
VPS52-214ENST00000463486 CYB561P49447 251 aa16.38■□□□□ 0.21
VPS52-214ENST00000463486 RPL14P50914 215 aaKnown RBP16.38■□□□□ 0.21
VPS52-214ENST00000463486 RPL38P63173 70 aaKnown RBP16.38■□□□□ 0.21
VPS52-214ENST00000463486 GALNTL6Q49A17 601 aa16.38■□□□□ 0.21
VPS52-214ENST00000463486 TRMT12Q53H54 448 aaKnown RBP16.38■□□□□ 0.21
VPS52-214ENST00000463486 ZNF628Q5EBL2 1059 aa16.38■□□□□ 0.21
VPS52-214ENST00000463486 ZNF766Q5HY98 468 aa16.38■□□□□ 0.21
VPS52-214ENST00000463486 LYPD8Q6UX82 237 aa16.38■□□□□ 0.21
VPS52-214ENST00000463486 MDGA2Q7Z553 956 aa16.38■□□□□ 0.21
VPS52-214ENST00000463486 CCDC116Q8IYX3 515 aa16.38■□□□□ 0.21
VPS52-214ENST00000463486 LRRC25Q8N386 305 aaPredicted RBP16.38■□□□□ 0.21
VPS52-214ENST00000463486 ADCY4Q8NFM4 1077 aa16.38■□□□□ 0.21
VPS52-214ENST00000463486 OR5L2Q8NGL0 311 aa16.38■□□□□ 0.21
VPS52-214ENST00000463486 WWTR1Q9GZV5 400 aa16.38■□□□□ 0.21
VPS52-214ENST00000463486 PNPOQ9NVS9 261 aa16.38■□□□□ 0.21
VPS52-214ENST00000463486 ZNF446Q9NWS9 450 aa16.38■□□□□ 0.21
VPS52-214ENST00000463486 MAP10Q9P2G4 905 aa16.38■□□□□ 0.21
VPS52-214ENST00000463486 ZNF780BQ9Y6R6 833 aa16.38■□□□□ 0.21
VPS52-214ENST00000463486 OR6C76A6NM76 312 aa16.37■□□□□ 0.21
VPS52-214ENST00000463486 FCHO1O14526 889 aa16.37■□□□□ 0.21
VPS52-214ENST00000463486 DYRK3O43781 588 aa16.37■□□□□ 0.21
VPS52-214ENST00000463486 TBX19O60806 448 aa16.37■□□□□ 0.21
VPS52-214ENST00000463486 PEX11AO75192 247 aa16.37■□□□□ 0.21
VPS52-214ENST00000463486 WISP2O76076 250 aa16.37■□□□□ 0.21
VPS52-214ENST00000463486 WISP1O95388 367 aa16.37■□□□□ 0.21
VPS52-214ENST00000463486 SP1P08047 785 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms