RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	LRRC25	Q8N386	305 aa	Predicted RBP	8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	OR5L2	Q8NGL0	311 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	OR2T11	Q8NH01	316 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	ZNF721	Q8TF20	911 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	ASB15	Q8WXK1	588 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	GFM2	Q969S9	779 aa	Known RBP	8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	TMEM125	Q96AQ2	219 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	ARL8A	Q96BM9	186 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	SNRNP40	Q96DI7	357 aa	Known RBP	8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	FBXL20	Q96IG2	436 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	SIGLEC12	Q96PQ1	595 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	HES7	Q9BYE0	225 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	RNF32	Q9H0A6	362 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	TUBB1	Q9H4B7	451 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	CXorf21	Q9HAI6	301 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	AGPAT4	Q9NRZ5	378 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	ZDHHC2	Q9UIJ5	367 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	NTNG1	Q9Y2I2	539 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	YARS2	Q9Y2Z4	477 aa	Known RBP	8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	UBR5	O95071	2799 aa	Predicted RBP	8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970		A8MVJ9	347 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	SLC25A12	O75746	678 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	WISP1	O95388	367 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	FGF4	P08620	206 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	CT62	P0C5K7	136 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	DHRS4L1	P0CG22	281 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	GNLY	P22749	145 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	GRK2	P25098	689 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	SOX3	P41225	446 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	PMP22	Q01453	160 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	KCNC4	Q03721	635 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	DUSP2	Q05923	314 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	ELOA	Q14241	798 aa	Known RBP	8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	EXOSC7	Q15024	291 aa	Known RBP	8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	ATP6AP1L	Q52LC2	224 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	AGBL2	Q5U5Z8	902 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	ANKRD26P1	Q6NSI1	321 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	GALNT18	Q6P9A2	607 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	TICAM1	Q8IUC6	712 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	C9orf40	Q8IXQ3	194 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	CCDC116	Q8IYX3	515 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	VWA5B2	Q8N398	1253 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	ZNF781	Q8N8C0	355 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	TMEM178A	Q8NBL3	297 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	FAM76A	Q8TAV0	307 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	GRHL3	Q8TE85	626 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	KAT2A	Q92830	837 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	MIB2	Q96AX9	1013 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	TLCD1	Q96CP7	247 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	TUBGCP3	Q96CW5	907 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	PPP3R2	Q96LZ3	170 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	TSSK3	Q96PN8	268 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	C1orf50	Q9BV19	199 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	MYNN	Q9NPC7	610 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	HPF1	Q9NWY4	346 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	MYOT	Q9UBF9	498 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	BAIAP2L1	Q9UHR4	511 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	CES1P1	Q9UKY3	287 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	PPIE	Q9UNP9	301 aa	Known RBP	8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	CCL27	Q9Y4X3	112 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	NIN	Q8N4C6	2090 aa		8.92	□□□□□ -0.98
PSMD4-208	ENST00000462970	C2orf92	A0A1B0GVN3	265 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	C2orf72	A6NCS6	295 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970		G3V3Y1	287 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	LSM1	O15116	133 aa	Known RBP	8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	OR6B1	O95007	311 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	RASAL1	O95294	804 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	JUN	P05412	331 aa	Known RBP	8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	SP1	P08047	785 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	KIT	P10721	976 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	H2AFX	P16104	143 aa	Predicted RBP	8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	PCSK2	P16519	638 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	DDC	P20711	480 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	TACR1	P25103	407 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	MAPK1	P28482	360 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	NTS	P30990	170 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	GSTM5	P46439	218 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	UQCRFS1	P47985	274 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	NR0B1	P51843	470 aa	Known RBP	8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	NCBP2	P52298	156 aa	Known RBP eCLIP	8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	WDR4	P57081	412 aa	Known RBP	8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	MRPS35	P82673	323 aa	Known RBP	8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	BST1	Q10588	318 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	NNAT	Q16517	81 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	SPRED3	Q2MJR0	410 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	UGT3A2	Q3SY77	523 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	RFTN2	Q52LD8	501 aa	Predicted RBP	8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	SLC25A25	Q6KCM7	469 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	TMEM64	Q6YI46	380 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970		Q6ZSR9	355 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	GALNTL5	Q7Z4T8	443 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	FAM9C	Q8IZT9	166 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	BCORP1	Q8N888	145 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	FNDC5	Q8NAU1	212 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	FAM98A	Q8NCA5	519 aa	Known RBP	8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	MDS2	Q8NDY4	140 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	FAM13C	Q8NE31	585 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	OR5M3	Q8NGP4	307 aa		8.91	□□□□□ -0.98
PSMD4-208	ENST00000462970	OR9A2	Q8NGT5	310 aa		8.91	□□□□□ -0.98

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms