RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 ARHGAP11AQ6P4F7 1023 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 LYPD8Q6UX82 237 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 ZYG11AQ6WRX3 759 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 NCCRP1Q6ZVX7 275 aaPredicted RBP9.39□□□□□ -0.91
SF3A3-204ENST00000462258 SLC22A16Q86VW1 577 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 TDRPQ86YL5 185 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 DND1Q8IYX4 353 aaKnown RBP9.39□□□□□ -0.91
SF3A3-204ENST00000462258 TAGAPQ8N103 731 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 MMP21Q8N119 569 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 EID3Q8N140 333 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 SLC15A4Q8N697 577 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 OR52N2Q8NGI0 321 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 METTL6Q8TCB7 284 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 KLHL29Q96CT2 875 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 CCDC126Q96EE4 140 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 KCNA7Q96RP8 456 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 FAIM2Q9BWQ8 316 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 ACPTQ9BZG2 426 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 ZDHHC11Q9H8X9 412 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 CXorf21Q9HAI6 301 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 SH2D2AQ9NP31 389 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 PLSCR2Q9NRY7 297 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 VPS29Q9UBQ0 182 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 DCDC2Q9UHG0 476 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 MCM8Q9UJA3 840 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 KLF2Q9Y5W3 355 aaPredicted RBP9.39□□□□□ -0.91
SF3A3-204ENST00000462258 PCNX1Q96RV3 2341 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 CELSR2Q9HCU4 2923 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 DNAJC13O75165 2243 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 C2orf92A0A1B0GVN3 265 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 CCDC151A5D8V7 595 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 G3V2L1 256 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 PCDH7O60245 1069 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 CDH16O75309 829 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 ULK1O75385 1050 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 ERAL1O75616 437 aaKnown RBP9.38□□□□□ -0.91
SF3A3-204ENST00000462258 GLSO94925 669 aaPredicted RBP9.38□□□□□ -0.91
SF3A3-204ENST00000462258 ESRRBO95718 433 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 PROCP04070 461 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 CHN1P15882 459 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 PORP16435 677 aaPredicted RBP9.38□□□□□ -0.91
SF3A3-204ENST00000462258 CNR1P21554 472 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 DEKP35659 375 aaKnown RBP9.38□□□□□ -0.91
SF3A3-204ENST00000462258 MAGEA5P43359 124 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 ALDH9A1P49189 494 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 SMSP52788 366 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 TRA2BP62995 288 aaKnown RBP9.38□□□□□ -0.91
SF3A3-204ENST00000462258 KCNJ2P63252 427 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 HMGCS1Q01581 520 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 FUT7Q11130 342 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 ART3Q13508 389 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 RPS6KA2Q15349 733 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 ZNF791Q3KP31 576 aaPredicted RBP9.38□□□□□ -0.91
SF3A3-204ENST00000462258 CCDC153Q494R4 210 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 SPIN4Q56A73 249 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 PRAMEF20Q5VT98 475 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 HLA-DQA1Q5Y7H0 255 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 PAOXQ6QHF9 649 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 C3P1Q6ZMU1 363 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 RGS9BPQ6ZS82 235 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 FRMD7Q6ZUT3 714 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 DOLPP1Q86YN1 238 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 VWA5B2Q8N398 1253 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 FBXW8Q8N3Y1 598 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 FAM109AQ8N4B1 249 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 TMEM251Q8N6I4 163 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 CCNYL1Q8N7R7 359 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 GBP7Q8N8V2 638 aaPredicted RBP9.38□□□□□ -0.91
SF3A3-204ENST00000462258 ZNF441Q8N8Z8 693 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 CCDC63Q8NA47 563 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 FAM13CQ8NE31 585 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 OR10G3Q8NGC4 313 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 FAM57AQ8TBR7 257 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 RDH11Q8TC12 318 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 PAQR8Q8TEZ7 354 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 PHF10Q8WUB8 498 aaKnown RBP9.38□□□□□ -0.91
SF3A3-204ENST00000462258 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.38□□□□□ -0.91
SF3A3-204ENST00000462258 TM4SF18Q96CE8 201 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 PHF12Q96QT6 1004 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 BRINP2Q9C0B6 783 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 DEFB127Q9H1M4 99 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 OR10A5Q9H207 317 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 ZNF703Q9H7S9 590 aaPredicted RBP9.38□□□□□ -0.91
SF3A3-204ENST00000462258 ANKZF1Q9H8Y5 726 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 IL1RL2Q9HB29 575 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 MID1IP1Q9NPA3 183 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 RYDENQ9NUL5 291 aaKnown RBP9.38□□□□□ -0.91
SF3A3-204ENST00000462258 TUBA8Q9NY65 449 aaPredicted RBP9.38□□□□□ -0.91
SF3A3-204ENST00000462258 CES1P1Q9UKY3 287 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 ENTPD4Q9Y227 616 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 LIPGQ9Y5X9 500 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 ITPR2Q14571 2701 aa9.38□□□□□ -0.91
SF3A3-204ENST00000462258 NOTCH2Q04721 2471 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 GNG14A0A1W2PPG7 69 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 E9PLN8 166 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 COPEO14579 308 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 PLIN3O60664 434 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 PDE9AO76083 593 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 LRATO95237 230 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 ATP1B1P05026 303 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms