RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 LRRC14BA6NHZ5 514 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 FAM90A27PA6NNH2 459 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 OR7A17O14581 309 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 SUSD5O60279 629 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 HCN1O60741 890 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 WDR1O75083 606 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 ULK1O75385 1050 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 EEDO75530 441 aaKnown RBP8.19□□□□□ -1.1
LDB1-203ENST00000461873 PRKRAO75569 313 aaKnown RBP8.19□□□□□ -1.1
LDB1-203ENST00000461873 BCAS2O75934 225 aaPredicted RBP8.19□□□□□ -1.1
LDB1-203ENST00000461873 AIFM1O95831 613 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 HOXD4P09016 255 aaPredicted RBP8.19□□□□□ -1.1
LDB1-203ENST00000461873 CSNK2A2P19784 350 aaPredicted RBP8.19□□□□□ -1.1
LDB1-203ENST00000461873 ACVR2AP27037 513 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 GDF1P27539 372 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 GRNP28799 593 aaKnown RBP8.19□□□□□ -1.1
LDB1-203ENST00000461873 BSGP35613 385 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 MAGEA5P43359 124 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 CDH13P55290 713 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 NAA20P61599 178 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 IGLV3-21P80748 117 aaPredicted RBP8.19□□□□□ -1.1
LDB1-203ENST00000461873 ADORA2A-AS1P86434 159 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 CLCQ05315 142 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 PMPCAQ10713 525 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 IMPG1Q17R60 797 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 GGTA1PQ4G0N0 100 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 GXYLT1Q4G148 440 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 CFAP157Q5JU67 520 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 RNFT1Q5M7Z0 435 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 PRAMEF20Q5VT98 475 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 B3GNT6Q6ZMB0 384 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 MEX3BQ6ZN04 569 aaKnown RBP8.19□□□□□ -1.1
LDB1-203ENST00000461873 ZNF227Q86WZ6 799 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 TICAM1Q8IUC6 712 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 C9orf40Q8IXQ3 194 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 SAMD14Q8IZD0 417 aaPredicted RBP8.19□□□□□ -1.1
LDB1-203ENST00000461873 CLYBLQ8N0X4 340 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 PLD6Q8N2A8 252 aaKnown RBP8.19□□□□□ -1.1
LDB1-203ENST00000461873 OR7G1Q8NGA0 311 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 OR52B6Q8NGF0 335 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 OR5M9Q8NGP3 310 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 WDR20Q8TBZ3 569 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 METTL6Q8TCB7 284 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 TRPC4APQ8TEL6 797 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 DOK4Q8TEW6 326 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 TP53INP1Q96A56 240 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 KLHL29Q96CT2 875 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 ZNF597Q96LX8 424 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 FUT8Q9BYC5 575 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 MRPL1Q9BYD6 325 aaKnown RBP8.19□□□□□ -1.1
LDB1-203ENST00000461873 WWTR1Q9GZV5 400 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 IQCGQ9H095 443 aaKnown RBP8.19□□□□□ -1.1
LDB1-203ENST00000461873 OR10A5Q9H207 317 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 METTL7AQ9H8H3 244 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 ZFP64Q9NPA5 681 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 ZNF358Q9NW07 568 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 PSMC3IPQ9P2W1 217 aaPredicted RBP8.19□□□□□ -1.1
LDB1-203ENST00000461873 VPS29Q9UBQ0 182 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 PRODH2Q9UF12 536 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 TRPS1Q9UHF7 1281 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 DCDC2Q9UHG0 476 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 RAB21Q9UL25 225 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 ASB4Q9Y574 426 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 MAST4O15021 2626 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 PCNX1Q96RV3 2341 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 C15orf38-AP3S2A0A0A6YYH1 394 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 HMX2A2RU54 273 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 AQP7O14520 342 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 ZNHIT1O43257 154 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 TMPRSS11DO60235 418 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 SNX4O95219 450 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 PDYNP01213 254 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 ABHD2P08910 425 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 CCL3P10147 92 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 HSD3B1P14060 373 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 CPMP14384 443 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 ATP5F1P24539 256 aaPredicted RBP8.18□□□□□ -1.1
LDB1-203ENST00000461873 ELAVL4P26378 380 aaKnown RBP8.18□□□□□ -1.1
LDB1-203ENST00000461873 HSD3B2P26439 372 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 PIGAP37287 484 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 CCT5P48643 541 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 TRA2BP62995 288 aaKnown RBP8.18□□□□□ -1.1
LDB1-203ENST00000461873 ACSM2AQ08AH3 577 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 HEPACAMQ14CZ8 416 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 RPS6KA2Q15349 733 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 SPIN4Q56A73 249 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 SPDYAQ5MJ70 313 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 CES4AQ5XG92 561 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 ACSM2BQ68CK6 577 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 WDR93Q6P2C0 686 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 GPRIN3Q6ZVF9 776 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 PM20D2Q8IYS1 436 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 VWA5B2Q8N398 1253 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 METTL4Q8N3J2 472 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 FBXW8Q8N3Y1 598 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 TMEM251Q8N6I4 163 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 CDYL2Q8N8U2 506 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 GBP7Q8N8V2 638 aaPredicted RBP8.18□□□□□ -1.1
LDB1-203ENST00000461873 ACMSDQ8TDX5 336 aa8.18□□□□□ -1.1
LDB1-203ENST00000461873 PAQR8Q8TEZ7 354 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms