RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 TUBBP07437 444 aa17.04■□□□□ 0.32
COL9A2-205ENST00000461118 CHN1P15882 459 aa17.04■□□□□ 0.32
COL9A2-205ENST00000461118 AGAP20933 346 aa17.04■□□□□ 0.32
COL9A2-205ENST00000461118 PIK3R1P27986 724 aa17.04■□□□□ 0.32
COL9A2-205ENST00000461118 KIR3DL1P43629 444 aa17.04■□□□□ 0.32
COL9A2-205ENST00000461118 HTR6P50406 440 aa17.04■□□□□ 0.32
COL9A2-205ENST00000461118 CFAP157Q5JU67 520 aa17.04■□□□□ 0.32
COL9A2-205ENST00000461118 LIPMQ5VYY2 423 aa17.04■□□□□ 0.32
COL9A2-205ENST00000461118 CCDC63Q8NA47 563 aa17.04■□□□□ 0.32
COL9A2-205ENST00000461118 OR4K14Q8NGD5 310 aa17.04■□□□□ 0.32
COL9A2-205ENST00000461118 C11orf24Q96F05 449 aaPredicted RBP17.04■□□□□ 0.32
COL9A2-205ENST00000461118 APOPT1Q96IL0 206 aa17.04■□□□□ 0.32
COL9A2-205ENST00000461118 KCNA7Q96RP8 456 aa17.04■□□□□ 0.32
COL9A2-205ENST00000461118 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.04■□□□□ 0.322e-8■■■■■ 52.9
COL9A2-205ENST00000461118 SIRT5Q9NXA8 310 aa17.04■□□□□ 0.32
COL9A2-205ENST00000461118 MCM8Q9UJA3 840 aa17.04■□□□□ 0.32
COL9A2-205ENST00000461118 TINAGQ9UJW2 476 aa17.04■□□□□ 0.32
COL9A2-205ENST00000461118 CES1P1Q9UKY3 287 aa17.04■□□□□ 0.32
COL9A2-205ENST00000461118 PCDHA9Q9Y5H5 950 aa17.04■□□□□ 0.32
COL9A2-205ENST00000461118 HCFC1P51610 2035 aa17.04■□□□□ 0.32
COL9A2-205ENST00000461118 ITPR3Q14573 2671 aa17.03■□□□□ 0.32
COL9A2-205ENST00000461118 OR10H2O60403 315 aa17.03■□□□□ 0.32
COL9A2-205ENST00000461118 FOXA1P55317 472 aa17.03■□□□□ 0.32
COL9A2-205ENST00000461118 MAPKAPK3Q16644 382 aa17.03■□□□□ 0.32
COL9A2-205ENST00000461118 MPEG1Q2M385 716 aa17.03■□□□□ 0.32
COL9A2-205ENST00000461118 SPIN4Q56A73 249 aa17.03■□□□□ 0.32
COL9A2-205ENST00000461118 SLC48A1Q6P1K1 146 aa17.03■□□□□ 0.32
COL9A2-205ENST00000461118 GALNT18Q6P9A2 607 aa17.03■□□□□ 0.32
COL9A2-205ENST00000461118 C16orf47Q6ZP98 133 aaPredicted RBP17.03■□□□□ 0.32
COL9A2-205ENST00000461118 Q6ZPB1 254 aaPredicted RBP17.03■□□□□ 0.32
COL9A2-205ENST00000461118 CYP4Z2PQ8N1L4 340 aa17.03■□□□□ 0.32
COL9A2-205ENST00000461118 ACBD4Q8NC06 268 aa17.03■□□□□ 0.32
COL9A2-205ENST00000461118 FAM98AQ8NCA5 519 aaKnown RBP17.03■□□□□ 0.32
COL9A2-205ENST00000461118 NUBPLQ8TB37 319 aa17.03■□□□□ 0.32
COL9A2-205ENST00000461118 RIT1Q92963 219 aa17.03■□□□□ 0.32
COL9A2-205ENST00000461118 FRMD6Q96NE9 622 aa17.03■□□□□ 0.32
COL9A2-205ENST00000461118 RASL10BQ96S79 203 aa17.03■□□□□ 0.32
COL9A2-205ENST00000461118 IQCGQ9H095 443 aaKnown RBP17.03■□□□□ 0.32
COL9A2-205ENST00000461118 LIN28AQ9H9Z2 209 aaKnown RBP17.03■□□□□ 0.32
COL9A2-205ENST00000461118 RYDENQ9NUL5 291 aaKnown RBP17.03■□□□□ 0.32
COL9A2-205ENST00000461118 ITGB1BP2Q9UKP3 347 aa17.03■□□□□ 0.32
COL9A2-205ENST00000461118 HRKO00198 91 aa17.02■□□□□ 0.32
COL9A2-205ENST00000461118 WWP2O00308 870 aa17.02■□□□□ 0.32
COL9A2-205ENST00000461118 TRIM13O60858 407 aa17.02■□□□□ 0.32
COL9A2-205ENST00000461118 XKP51811 444 aa17.02■□□□□ 0.32
COL9A2-205ENST00000461118 ZNF267Q14586 743 aaPredicted RBP17.02■□□□□ 0.32
COL9A2-205ENST00000461118 PCLAFQ15004 111 aa17.02■□□□□ 0.32
COL9A2-205ENST00000461118 MDGA2Q7Z553 956 aa17.02■□□□□ 0.32
COL9A2-205ENST00000461118 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.02■□□□□ 0.32
COL9A2-205ENST00000461118 C10orf107Q8IVU9 208 aa17.02■□□□□ 0.32
COL9A2-205ENST00000461118 C9orf40Q8IXQ3 194 aa17.02■□□□□ 0.32
COL9A2-205ENST00000461118 TRMOQ9BU70 441 aa17.02■□□□□ 0.32
COL9A2-205ENST00000461118 CXorf21Q9HAI6 301 aa17.02■□□□□ 0.32
COL9A2-205ENST00000461118 PSME2Q9UL46 239 aa17.02■□□□□ 0.32
COL9A2-205ENST00000461118 KLF13Q9Y2Y9 288 aaPredicted RBP17.02■□□□□ 0.32
COL9A2-205ENST00000461118 A0A1W2PS29 197 aa17.01■□□□□ 0.31
COL9A2-205ENST00000461118 OR6C76A6NM76 312 aa17.01■□□□□ 0.31
COL9A2-205ENST00000461118 A8MVJ9 347 aa17.01■□□□□ 0.31
COL9A2-205ENST00000461118 CPMP14384 443 aa17.01■□□□□ 0.31
COL9A2-205ENST00000461118 PORP16435 677 aaPredicted RBP17.01■□□□□ 0.31
COL9A2-205ENST00000461118 SLC37A1P57057 533 aa17.01■□□□□ 0.31
COL9A2-205ENST00000461118 ERVK-8P63133 956 aa17.01■□□□□ 0.31
COL9A2-205ENST00000461118 RAE1P78406 368 aaKnown RBP17.01■□□□□ 0.31
COL9A2-205ENST00000461118 HMGCS1Q01581 520 aa17.01■□□□□ 0.31
COL9A2-205ENST00000461118 RBPJQ06330 500 aa17.01■□□□□ 0.31
COL9A2-205ENST00000461118 ACSM2AQ08AH3 577 aa17.01■□□□□ 0.31
COL9A2-205ENST00000461118 FUT7Q11130 342 aa17.01■□□□□ 0.31
COL9A2-205ENST00000461118 ASPHQ12797 758 aa17.01■□□□□ 0.31
COL9A2-205ENST00000461118 KRTCAP3Q53RY4 240 aa17.01■□□□□ 0.31
COL9A2-205ENST00000461118 PIGGQ5H8A4 983 aa17.01■□□□□ 0.31
COL9A2-205ENST00000461118 ACSM2BQ68CK6 577 aa17.01■□□□□ 0.31
COL9A2-205ENST00000461118 OPN5Q6U736 354 aa17.01■□□□□ 0.31
COL9A2-205ENST00000461118 NCCRP1Q6ZVX7 275 aaPredicted RBP17.01■□□□□ 0.31
COL9A2-205ENST00000461118 TRIM46Q7Z4K8 759 aa17.01■□□□□ 0.31
COL9A2-205ENST00000461118 POGLUT1Q8NBL1 392 aa17.01■□□□□ 0.31
COL9A2-205ENST00000461118 ASB15Q8WXK1 588 aa17.01■□□□□ 0.31
COL9A2-205ENST00000461118 FAIM2Q9BWQ8 316 aa17.01■□□□□ 0.31
COL9A2-205ENST00000461118 GATA5Q9BWX5 397 aaPredicted RBP17.01■□□□□ 0.31
COL9A2-205ENST00000461118 TIMMDC1Q9NPL8 285 aa17.01■□□□□ 0.31
COL9A2-205ENST00000461118 HPF1Q9NWY4 346 aa17.01■□□□□ 0.31
COL9A2-205ENST00000461118 ERVK-19Q9WJR5 959 aa17.01■□□□□ 0.31
COL9A2-205ENST00000461118 KLRC4-KLRK1H3BQV0 150 aa17■□□□□ 0.31
COL9A2-205ENST00000461118 ZNF354AO60765 605 aaPredicted RBP17■□□□□ 0.31
COL9A2-205ENST00000461118 OR6B1O95007 311 aa17■□□□□ 0.31
COL9A2-205ENST00000461118 CLPSP04118 112 aa17■□□□□ 0.31
COL9A2-205ENST00000461118 UROSP10746 265 aa17■□□□□ 0.31
COL9A2-205ENST00000461118 SOX3P41225 446 aa17■□□□□ 0.31
COL9A2-205ENST00000461118 GSTM5P46439 218 aa17■□□□□ 0.31
COL9A2-205ENST00000461118 ALDH6A1Q02252 535 aaKnown RBP17■□□□□ 0.31
COL9A2-205ENST00000461118 IL20RBQ6UXL0 311 aa17■□□□□ 0.31
COL9A2-205ENST00000461118 SPNS3Q6ZMD2 512 aa17■□□□□ 0.31
COL9A2-205ENST00000461118 RNF111Q6ZNA4 994 aa17■□□□□ 0.31
COL9A2-205ENST00000461118 SIAH3Q8IW03 269 aa17■□□□□ 0.31
COL9A2-205ENST00000461118 SULF2Q8IWU5 870 aa17■□□□□ 0.31
COL9A2-205ENST00000461118 CHERPQ8IWX8 916 aaKnown RBP17■□□□□ 0.31
COL9A2-205ENST00000461118 HOMEZQ8IX15 550 aa17■□□□□ 0.31
COL9A2-205ENST00000461118 GALNT12Q8IXK2 581 aa17■□□□□ 0.31
COL9A2-205ENST00000461118 SLC15A4Q8N697 577 aa17■□□□□ 0.31
COL9A2-205ENST00000461118 TCP10LQ8TDR4 215 aa17■□□□□ 0.31
COL9A2-205ENST00000461118 APIPQ96GX9 242 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms