RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 MAPKAPK3Q16644 382 aa13.67□□□□□ -0.22
NCK1-202ENST00000460960 Q6ZSR9 355 aa13.67□□□□□ -0.22
NCK1-202ENST00000460960 TRIM46Q7Z4K8 759 aa13.67□□□□□ -0.22
NCK1-202ENST00000460960 CLNKQ7Z7G1 428 aa13.67□□□□□ -0.22
NCK1-202ENST00000460960 TMEM200AQ86VY9 491 aa13.67□□□□□ -0.22
NCK1-202ENST00000460960 DOLPP1Q86YN1 238 aa13.67□□□□□ -0.22
NCK1-202ENST00000460960 EID3Q8N140 333 aa13.67□□□□□ -0.22
NCK1-202ENST00000460960 HORMAD2Q8N7B1 307 aa13.67□□□□□ -0.22
NCK1-202ENST00000460960 TWIST2Q8WVJ9 160 aa13.67□□□□□ -0.22
NCK1-202ENST00000460960 C11orf24Q96F05 449 aaPredicted RBP13.67□□□□□ -0.22
NCK1-202ENST00000460960 OR1F2PQ96R84 312 aa13.67□□□□□ -0.22
NCK1-202ENST00000460960 NPLQ9BXD5 320 aaPredicted RBP13.67□□□□□ -0.22
NCK1-202ENST00000460960 EBPLQ9BY08 206 aa13.67□□□□□ -0.22
NCK1-202ENST00000460960 NECTIN3Q9NQS3 549 aa13.67□□□□□ -0.22
NCK1-202ENST00000460960 PNPOQ9NVS9 261 aa13.67□□□□□ -0.22
NCK1-202ENST00000460960 TEX10Q9NXF1 929 aaPredicted RBP13.67□□□□□ -0.22
NCK1-202ENST00000460960 PCDHGB6Q9Y5F9 930 aa13.67□□□□□ -0.22
NCK1-202ENST00000460960 NAV3Q8IVL0 2385 aa13.67□□□□□ -0.22
NCK1-202ENST00000460960 A0A1W2PR48 441 aa13.66□□□□□ -0.22
NCK1-202ENST00000460960 A0A1W2PS29 197 aa13.66□□□□□ -0.22
NCK1-202ENST00000460960 SERTM1A2A2V5 107 aa13.66□□□□□ -0.22
NCK1-202ENST00000460960 GLOD5A6NK44 160 aa13.66□□□□□ -0.22
NCK1-202ENST00000460960 E9PLN8 166 aa13.66□□□□□ -0.22
NCK1-202ENST00000460960 SNNO75324 88 aaPredicted RBP13.66□□□□□ -0.22
NCK1-202ENST00000460960 FAM58BPP0C7Q3 252 aa13.66□□□□□ -0.22
NCK1-202ENST00000460960 HSD3B1P14060 373 aa13.66□□□□□ -0.22
NCK1-202ENST00000460960 ZNF24P17028 368 aa13.66□□□□□ -0.22
NCK1-202ENST00000460960 HSD3B2P26439 372 aa13.66□□□□□ -0.22
NCK1-202ENST00000460960 TAS2R50P59544 299 aa13.66□□□□□ -0.22
NCK1-202ENST00000460960 ID2Q02363 134 aa13.66□□□□□ -0.22
NCK1-202ENST00000460960 EXT1Q16394 746 aa13.66□□□□□ -0.22
NCK1-202ENST00000460960 C10orf62Q5T681 223 aaPredicted RBP13.66□□□□□ -0.22
NCK1-202ENST00000460960 PAPD4Q6PIY7 484 aaKnown RBP13.66□□□□□ -0.22
NCK1-202ENST00000460960 ANKRD37Q7Z713 158 aa13.66□□□□□ -0.22
NCK1-202ENST00000460960 CLYBLQ8N0X4 340 aa13.66□□□□□ -0.22
NCK1-202ENST00000460960 ZCCHC7Q8N3Z6 543 aaKnown RBP13.66□□□□□ -0.22
NCK1-202ENST00000460960 SLC5A8Q8N695 610 aa13.66□□□□□ -0.22
NCK1-202ENST00000460960 SRFBP1Q8NEF9 429 aaKnown RBP13.66□□□□□ -0.22
NCK1-202ENST00000460960 PHF10Q8WUB8 498 aaKnown RBP13.66□□□□□ -0.22
NCK1-202ENST00000460960 SREK1Q8WXA9 508 aaKnown RBP13.66□□□□□ -0.22
NCK1-202ENST00000460960 ZNF75CPQ92670 426 aaPredicted RBP13.66□□□□□ -0.22
NCK1-202ENST00000460960 SCMH1Q96GD3 660 aa13.66□□□□□ -0.22
NCK1-202ENST00000460960 PPP1R36Q96LQ0 422 aa13.66□□□□□ -0.22
NCK1-202ENST00000460960 VKORC1Q9BQB6 163 aa13.66□□□□□ -0.22
NCK1-202ENST00000460960 ENKD1Q9H0I2 346 aa13.66□□□□□ -0.22
NCK1-202ENST00000460960 MANSC1Q9H8J5 431 aa13.66□□□□□ -0.22
NCK1-202ENST00000460960 EML4Q9HC35 981 aaKnown RBP13.66□□□□□ -0.22
NCK1-202ENST00000460960 LYRM4Q9HD34 91 aa13.66□□□□□ -0.22
NCK1-202ENST00000460960 LRFN1Q9P244 771 aa13.66□□□□□ -0.22
NCK1-202ENST00000460960 INTS1Q8N201 2190 aaKnown RBP13.66□□□□□ -0.22
NCK1-202ENST00000460960 A0A088AWK7 358 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 IGKV3D-11A0A0A0MRZ8 115 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 ATP6AP2A0A1C7CYW4 349 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 ASPDHA6ND91 283 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 FAM90A27PA6NNH2 459 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 ATP6AP2O75787 350 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 AIFM1O95831 613 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 TPOP07202 933 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 SP1P08047 785 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 ZNF10P21506 573 aaPredicted RBP13.65□□□□□ -0.22
NCK1-202ENST00000460960 GRK2P25098 689 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 SKP1P63208 163 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 OCRLQ01968 901 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 PDCD2Q16342 344 aaPredicted RBP13.65□□□□□ -0.22
NCK1-202ENST00000460960 SFT2D3Q587I9 215 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 XKR7Q5GH72 579 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 SPDYAQ5MJ70 313 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 SLC25A25Q6KCM7 469 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 GPR180Q86V85 440 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 NUDT13Q86X67 352 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 SIAH3Q8IW03 269 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 SCUBE1Q8IWY4 988 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 OR4N5Q8IXE1 308 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 DDIASQ8IXT1 998 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 GBP7Q8N8V2 638 aaPredicted RBP13.65□□□□□ -0.22
NCK1-202ENST00000460960 NPAS2Q99743 824 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 CENPKQ9BS16 269 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 CDCP1Q9H5V8 836 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 MARCOQ9UEW3 520 aaPredicted RBP13.65□□□□□ -0.22
NCK1-202ENST00000460960 HAO1Q9UJM8 370 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 RAP2CQ9Y3L5 183 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 SPG11Q96JI7 2443 aa13.65□□□□□ -0.22
NCK1-202ENST00000460960 PSMD12O00232 456 aaPredicted RBP13.64□□□□□ -0.23
NCK1-202ENST00000460960 LSM1O15116 133 aaKnown RBP13.64□□□□□ -0.23
NCK1-202ENST00000460960 PGRMC2O15173 223 aa13.64□□□□□ -0.23
NCK1-202ENST00000460960 PROM1O43490 865 aa13.64□□□□□ -0.23
NCK1-202ENST00000460960 FGF17O60258 216 aa13.64□□□□□ -0.23
NCK1-202ENST00000460960 CDC40O60508 579 aaKnown RBP eCLIP13.64□□□□□ -0.23
NCK1-202ENST00000460960 LDB3O75112 727 aa13.64□□□□□ -0.23
NCK1-202ENST00000460960 SLC25A12O75746 678 aa13.64□□□□□ -0.23
NCK1-202ENST00000460960 CPN2P22792 545 aa13.64□□□□□ -0.23
NCK1-202ENST00000460960 PTGER1P34995 402 aa13.64□□□□□ -0.23
NCK1-202ENST00000460960 ARFIP1P53367 373 aa13.64□□□□□ -0.23
NCK1-202ENST00000460960 TNFRSF17Q02223 184 aa13.64□□□□□ -0.23
NCK1-202ENST00000460960 KIAA0040Q15053 153 aa13.64□□□□□ -0.23
NCK1-202ENST00000460960 IMPG1Q17R60 797 aa13.64□□□□□ -0.23
NCK1-202ENST00000460960 CCNYL2Q5T2Q4 361 aa13.64□□□□□ -0.23
NCK1-202ENST00000460960 NIPAL1Q6NVV3 410 aa13.64□□□□□ -0.23
NCK1-202ENST00000460960 H3F3CQ6NXT2 135 aa13.64□□□□□ -0.23
NCK1-202ENST00000460960 CYP20A1Q6UW02 462 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms