RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 CLHC1Q8NHS4 586 aa20.93■□□□□ 0.94
C9orf3-209ENST00000460573 SLC2A12Q8TD20 617 aa20.93■□□□□ 0.94
C9orf3-209ENST00000460573 GFM2Q969S9 779 aaKnown RBP20.93■□□□□ 0.94
C9orf3-209ENST00000460573 NCLNQ969V3 563 aa20.93■□□□□ 0.94
C9orf3-209ENST00000460573 SENP5Q96HI0 755 aaPredicted RBP20.93■□□□□ 0.94
C9orf3-209ENST00000460573 FBXL20Q96IG2 436 aa20.93■□□□□ 0.94
C9orf3-209ENST00000460573 BBS4Q96RK4 519 aa20.93■□□□□ 0.94
C9orf3-209ENST00000460573 SMAD5Q99717 465 aaKnown RBP20.93■□□□□ 0.94
C9orf3-209ENST00000460573 OR8D2Q9GZM6 311 aa20.93■□□□□ 0.94
C9orf3-209ENST00000460573 ZNF552Q9H707 407 aaPredicted RBP20.93■□□□□ 0.94
C9orf3-209ENST00000460573 CXorf21Q9HAI6 301 aa20.93■□□□□ 0.94
C9orf3-209ENST00000460573 TEKT2Q9UIF3 430 aa20.93■□□□□ 0.94
C9orf3-209ENST00000460573 GABRR3A8MPY1 467 aa20.92■□□□□ 0.94
C9orf3-209ENST00000460573 MYO1GB0I1T2 1018 aa20.92■□□□□ 0.94
C9orf3-209ENST00000460573 SCAMP2O15127 329 aaKnown RBP20.92■□□□□ 0.94
C9orf3-209ENST00000460573 POLR3GO15318 223 aaPredicted RBP20.92■□□□□ 0.94
C9orf3-209ENST00000460573 CELA2AP08217 269 aa20.92■□□□□ 0.94
C9orf3-209ENST00000460573 NT5EP21589 574 aa20.92■□□□□ 0.94
C9orf3-209ENST00000460573 NTSP30990 170 aa20.92■□□□□ 0.94
C9orf3-209ENST00000460573 PGDP52209 483 aa20.92■□□□□ 0.94
C9orf3-209ENST00000460573 DIO3P55073 304 aa20.92■□□□□ 0.94
C9orf3-209ENST00000460573 MAP4K2Q12851 820 aa20.92■□□□□ 0.94
C9orf3-209ENST00000460573 KLRB1Q12918 225 aa20.92■□□□□ 0.94
C9orf3-209ENST00000460573 ZNF267Q14586 743 aaPredicted RBP20.92■□□□□ 0.94
C9orf3-209ENST00000460573 ZNF750Q32MQ0 723 aa20.92■□□□□ 0.94
C9orf3-209ENST00000460573 CCDC116Q8IYX3 515 aa20.92■□□□□ 0.94
C9orf3-209ENST00000460573 SLC5A8Q8N695 610 aa20.92■□□□□ 0.94
C9orf3-209ENST00000460573 OR8K3Q8NH51 312 aa20.92■□□□□ 0.94
C9orf3-209ENST00000460573 BRIX1Q8TDN6 353 aaKnown RBP20.92■□□□□ 0.94
C9orf3-209ENST00000460573 PSMF1Q92530 271 aa20.92■□□□□ 0.94
C9orf3-209ENST00000460573 CCDC28BQ9BUN5 200 aa20.92■□□□□ 0.94
C9orf3-209ENST00000460573 NUDT9Q9BW91 350 aa20.92■□□□□ 0.94
C9orf3-209ENST00000460573 DEFB126Q9BYW3 111 aa20.92■□□□□ 0.94
C9orf3-209ENST00000460573 ATAD3AQ9NVI7 634 aa20.92■□□□□ 0.94
C9orf3-209ENST00000460573 AIG1Q9NVV5 245 aa20.92■□□□□ 0.94
C9orf3-209ENST00000460573 SH3BP4Q9P0V3 963 aa20.92■□□□□ 0.94
C9orf3-209ENST00000460573 TLN1Q9Y490 2541 aaKnown RBP20.92■□□□□ 0.94
C9orf3-209ENST00000460573 A0A1W2PS29 197 aa20.91■□□□□ 0.94
C9orf3-209ENST00000460573 SLITRK5O94991 958 aa20.91■□□□□ 0.94
C9orf3-209ENST00000460573 VIMP08670 466 aaKnown RBP20.91■□□□□ 0.94
C9orf3-209ENST00000460573 CASRP41180 1078 aa20.91■□□□□ 0.94
C9orf3-209ENST00000460573 IDH3AP50213 366 aa20.91■□□□□ 0.94
C9orf3-209ENST00000460573 GSTA3Q16772 222 aa20.91■□□□□ 0.94
C9orf3-209ENST00000460573 LSM12Q3MHD2 195 aaKnown RBP20.91■□□□□ 0.94
C9orf3-209ENST00000460573 DGAT2L6Q6ZPD8 337 aa20.91■□□□□ 0.94
C9orf3-209ENST00000460573 ASB18Q6ZVZ8 466 aa20.91■□□□□ 0.94
C9orf3-209ENST00000460573 RIMKLAQ8IXN7 391 aa20.91■□□□□ 0.94
C9orf3-209ENST00000460573 LGI4Q8N135 537 aa20.91■□□□□ 0.94
C9orf3-209ENST00000460573 OR7G1Q8NGA0 311 aa20.91■□□□□ 0.94
C9orf3-209ENST00000460573 ZNF675Q8TD23 568 aa20.91■□□□□ 0.94
C9orf3-209ENST00000460573 ZNF721Q8TF20 911 aa20.91■□□□□ 0.94
C9orf3-209ENST00000460573 ERP27Q96DN0 273 aa20.91■□□□□ 0.94
C9orf3-209ENST00000460573 ZNF354BQ96LW1 612 aa20.91■□□□□ 0.94
C9orf3-209ENST00000460573 LMF1Q96S06 567 aa20.91■□□□□ 0.94
C9orf3-209ENST00000460573 DPY30Q9C005 99 aa20.91■□□□□ 0.94
C9orf3-209ENST00000460573 EPN3Q9H201 632 aa20.91■□□□□ 0.94
C9orf3-209ENST00000460573 TCF7L2Q9NQB0 619 aa20.91■□□□□ 0.94
C9orf3-209ENST00000460573 ZNF451Q9Y4E5 1061 aa20.91■□□□□ 0.94
C9orf3-209ENST00000460573 MED13Q9UHV7 2174 aa20.9■□□□□ 0.94
C9orf3-209ENST00000460573 CDK2AP1O14519 115 aa20.9■□□□□ 0.94
C9orf3-209ENST00000460573 PDPK1O15530 556 aa20.9■□□□□ 0.94
C9orf3-209ENST00000460573 ZFAND5O76080 213 aa20.9■□□□□ 0.94
C9orf3-209ENST00000460573 IGKV3-11P04433 115 aa20.9■□□□□ 0.94
C9orf3-209ENST00000460573 ALDOCP09972 364 aaKnown RBP20.9■□□□□ 0.94
C9orf3-209ENST00000460573 TROVE2P10155 538 aaKnown RBP eCLIP20.9■□□□□ 0.94
C9orf3-209ENST00000460573 IDO1P14902 403 aa20.9■□□□□ 0.94
C9orf3-209ENST00000460573 SOX11P35716 441 aa20.9■□□□□ 0.94
C9orf3-209ENST00000460573 CLNS1AP54105 237 aaKnown RBP20.9■□□□□ 0.94
C9orf3-209ENST00000460573 FUT7Q11130 342 aa20.9■□□□□ 0.94
C9orf3-209ENST00000460573 RAPSNQ13702 412 aa20.9■□□□□ 0.94
C9orf3-209ENST00000460573 PRICKLE4Q2TBC4 344 aa20.9■□□□□ 0.94
C9orf3-209ENST00000460573 CPTPQ5TA50 214 aa20.9■□□□□ 0.94
C9orf3-209ENST00000460573 ISLR2Q6UXK2 745 aa20.9■□□□□ 0.94
C9orf3-209ENST00000460573 HSDL2Q6YN16 418 aa20.9■□□□□ 0.94
C9orf3-209ENST00000460573 ZFP28Q8NHY6 868 aa20.9■□□□□ 0.94
C9orf3-209ENST00000460573 TM9SF4Q92544 642 aa20.9■□□□□ 0.94
C9orf3-209ENST00000460573 OR52B2Q96RD2 323 aa20.9■□□□□ 0.94
C9orf3-209ENST00000460573 CNPPD1Q9BV87 410 aa20.9■□□□□ 0.94
C9orf3-209ENST00000460573 BRINP2Q9C0B6 783 aa20.9■□□□□ 0.94
C9orf3-209ENST00000460573 ERVK-19Q9WJR5 959 aa20.9■□□□□ 0.94
C9orf3-209ENST00000460573 TRBV11-1A0A0K0K1C0 115 aa20.89■□□□□ 0.93
C9orf3-209ENST00000460573 OR6C76A6NM76 312 aa20.89■□□□□ 0.93
C9orf3-209ENST00000460573 UBDO15205 165 aa20.89■□□□□ 0.93
C9orf3-209ENST00000460573 BCAS2O75934 225 aaPredicted RBP20.89■□□□□ 0.93
C9orf3-209ENST00000460573 FRKP42685 505 aaPredicted RBP20.89■□□□□ 0.93
C9orf3-209ENST00000460573 NCBP2P52298 156 aaKnown RBP eCLIP20.89■□□□□ 0.936e-7■■■■■ 27.1
C9orf3-209ENST00000460573 IRX1P78414 480 aaPredicted RBP20.89■□□□□ 0.93
C9orf3-209ENST00000460573 DUSP2Q05923 314 aa20.89■□□□□ 0.93
C9orf3-209ENST00000460573 RPS6KA2Q15349 733 aa20.89■□□□□ 0.93
C9orf3-209ENST00000460573 PRSS53Q2L4Q9 553 aa20.89■□□□□ 0.93
C9orf3-209ENST00000460573 DPY19L1Q2PZI1 675 aa20.89■□□□□ 0.93
C9orf3-209ENST00000460573 FAM180BQ6P0A1 224 aa20.89■□□□□ 0.93
C9orf3-209ENST00000460573 CAMKMTQ7Z624 323 aa20.89■□□□□ 0.93
C9orf3-209ENST00000460573 ARMC10Q8N2F6 343 aa20.89■□□□□ 0.93
C9orf3-209ENST00000460573 VWA5B2Q8N398 1253 aa20.89■□□□□ 0.93
C9orf3-209ENST00000460573 KIF2BQ8N4N8 673 aa20.89■□□□□ 0.93
C9orf3-209ENST00000460573 SIRT6Q8N6T7 355 aa20.89■□□□□ 0.93
C9orf3-209ENST00000460573 OR5L2Q8NGL0 311 aa20.89■□□□□ 0.93
C9orf3-209ENST00000460573 SUN3Q8TAQ9 357 aa20.89■□□□□ 0.93
C9orf3-209ENST00000460573 CTHRC1Q96CG8 243 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms