RNA–Protein interactions for RNA: ENST00000460475.1

PLOD3-209, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-209ENST00000460475 UTS2RQ9UKP6 389 aa16.48■□□□□ 0.23
PLOD3-209ENST00000460475 ERVK-19Q9WJR5 959 aa16.48■□□□□ 0.23
PLOD3-209ENST00000460475 FIS1Q9Y3D6 152 aa16.48■□□□□ 0.23
PLOD3-209ENST00000460475 USP9YO00507 2555 aaPredicted RBP16.48■□□□□ 0.23
PLOD3-209ENST00000460475 SPTBN1Q01082 2364 aaKnown RBP16.47■□□□□ 0.23
PLOD3-209ENST00000460475 TMEM120BA0PK00 339 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 WDR91A4D1P6 747 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 TCP11X1B4DZS4 312 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 LSM1O15116 133 aaKnown RBP16.47■□□□□ 0.23
PLOD3-209ENST00000460475 VPS4BO75351 444 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 ERAL1O75616 437 aaKnown RBP16.47■□□□□ 0.23
PLOD3-209ENST00000460475 SP1P08047 785 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 CT62P0C5K7 136 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 LINC00032P0C843 101 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 DDCP20711 480 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 SOX18P35713 384 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 FEN1P39748 380 aaKnown RBP16.47■□□□□ 0.23
PLOD3-209ENST00000460475 ALDH9A1P49189 494 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 ST13P50502 369 aaKnown RBP16.47■□□□□ 0.23
PLOD3-209ENST00000460475 WDR4P57081 412 aaKnown RBP16.47■□□□□ 0.23
PLOD3-209ENST00000460475 CHI3L2Q15782 390 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 PRICKLE4Q2TBC4 344 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 XKR7Q5GH72 579 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 PIGGQ5H8A4 983 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 SLC25A25Q6KCM7 469 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 RNF111Q6ZNA4 994 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 C16orf47Q6ZP98 133 aaPredicted RBP16.47■□□□□ 0.23
PLOD3-209ENST00000460475 IKBIPQ70UQ0 350 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 TMEM156Q8N614 296 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 TMEM178AQ8NBL3 297 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 DNAJB8Q8NHS0 232 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 PPP1R14CQ8TAE6 165 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 CTHRC1Q96CG8 243 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 RASL10BQ96S79 203 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 CNPPD1Q9BV87 410 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 LIN28AQ9H9Z2 209 aaKnown RBP16.47■□□□□ 0.23
PLOD3-209ENST00000460475 ZNF639Q9UID6 485 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 VPS4AQ9UN37 437 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.47■□□□□ 0.23
PLOD3-209ENST00000460475 TMED5Q9Y3A6 229 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 POLR3HQ9Y535 204 aaPredicted RBP16.47■□□□□ 0.23
PLOD3-209ENST00000460475 ZNF780BQ9Y6R6 833 aa16.47■□□□□ 0.23
PLOD3-209ENST00000460475 ASPDHA6ND91 283 aa16.46■□□□□ 0.23
PLOD3-209ENST00000460475 WWP2O00308 870 aa16.46■□□□□ 0.23
PLOD3-209ENST00000460475 PIP5K1BO14986 540 aa16.46■□□□□ 0.23
PLOD3-209ENST00000460475 ITM2AO43736 263 aa16.46■□□□□ 0.23
PLOD3-209ENST00000460475 NME2P1O60361 137 aa16.46■□□□□ 0.23
PLOD3-209ENST00000460475 SLC25A12O75746 678 aa16.46■□□□□ 0.23
PLOD3-209ENST00000460475 RASAL1O95294 804 aa16.46■□□□□ 0.23
PLOD3-209ENST00000460475 CBX6O95503 412 aa16.46■□□□□ 0.23
PLOD3-209ENST00000460475 H2AFXP16104 143 aaPredicted RBP16.46■□□□□ 0.23
PLOD3-209ENST00000460475 NME2P22392 152 aa16.46■□□□□ 0.23
PLOD3-209ENST00000460475 ABCE1P61221 599 aaKnown RBP16.46■□□□□ 0.23
PLOD3-209ENST00000460475 MAGOHP61326 146 aaKnown RBP16.46■□□□□ 0.23
PLOD3-209ENST00000460475 DUSP2Q05923 314 aa16.46■□□□□ 0.23
PLOD3-209ENST00000460475 C2orf80Q0P641 193 aa16.46■□□□□ 0.23
PLOD3-209ENST00000460475 EBPQ15125 230 aaKnown RBP16.46■□□□□ 0.23
PLOD3-209ENST00000460475 NR6A1Q15406 480 aa16.46■□□□□ 0.23
PLOD3-209ENST00000460475 RFTN2Q52LD8 501 aaPredicted RBP16.46■□□□□ 0.23
PLOD3-209ENST00000460475 AGBL2Q5U5Z8 902 aa16.46■□□□□ 0.23
PLOD3-209ENST00000460475 FAM180AQ6UWF9 173 aa16.46■□□□□ 0.23
PLOD3-209ENST00000460475 LRRC25Q8N386 305 aaPredicted RBP16.46■□□□□ 0.23
PLOD3-209ENST00000460475 SLC15A4Q8N697 577 aa16.46■□□□□ 0.23
PLOD3-209ENST00000460475 BCORP1Q8N888 145 aa16.46■□□□□ 0.23
PLOD3-209ENST00000460475 ZNF615Q8N8J6 731 aa16.46■□□□□ 0.23
PLOD3-209ENST00000460475 OR7G1Q8NGA0 311 aa16.46■□□□□ 0.23
PLOD3-209ENST00000460475 DOK4Q8TEW6 326 aa16.46■□□□□ 0.23
PLOD3-209ENST00000460475 C5orf34Q96MH7 638 aa16.46■□□□□ 0.23
PLOD3-209ENST00000460475 SLX1AQ9BQ83 275 aa16.46■□□□□ 0.23
PLOD3-209ENST00000460475 HES7Q9BYE0 225 aa16.46■□□□□ 0.23
PLOD3-209ENST00000460475 SLC35C2Q9NQQ7 365 aa16.46■□□□□ 0.23
PLOD3-209ENST00000460475 MAT2BQ9NZL9 334 aa16.46■□□□□ 0.23
PLOD3-209ENST00000460475 HAO1Q9UJM8 370 aa16.46■□□□□ 0.23
PLOD3-209ENST00000460475 EXO1Q9UQ84 846 aaKnown RBP16.46■□□□□ 0.23
PLOD3-209ENST00000460475 EML6Q6ZMW3 1958 aa16.46■□□□□ 0.22
PLOD3-209ENST00000460475 ZNF354AO60765 605 aaPredicted RBP16.45■□□□□ 0.22
PLOD3-209ENST00000460475 LYPLA1O75608 230 aaPredicted RBP16.45■□□□□ 0.22
PLOD3-209ENST00000460475 HSPA4LO95757 839 aa16.45■□□□□ 0.22
PLOD3-209ENST00000460475 NT5EP21589 574 aa16.45■□□□□ 0.22
PLOD3-209ENST00000460475 TACR1P25103 407 aa16.45■□□□□ 0.22
PLOD3-209ENST00000460475 SSTR4P31391 388 aa16.45■□□□□ 0.22
PLOD3-209ENST00000460475 SLC29A4Q7RTT9 530 aa16.45■□□□□ 0.22
PLOD3-209ENST00000460475 DDIASQ8IXT1 998 aa16.45■□□□□ 0.22
PLOD3-209ENST00000460475 CYP4Z2PQ8N1L4 340 aa16.45■□□□□ 0.22
PLOD3-209ENST00000460475 VWA5B2Q8N398 1253 aa16.45■□□□□ 0.22
PLOD3-209ENST00000460475 ZNF441Q8N8Z8 693 aa16.45■□□□□ 0.22
PLOD3-209ENST00000460475 AGR3Q8TD06 166 aa16.45■□□□□ 0.22
PLOD3-209ENST00000460475 ZNF675Q8TD23 568 aa16.45■□□□□ 0.22
PLOD3-209ENST00000460475 TMEM125Q96AQ2 219 aa16.45■□□□□ 0.22
PLOD3-209ENST00000460475 ZNF764Q96H86 408 aaPredicted RBP16.45■□□□□ 0.22
PLOD3-209ENST00000460475 C20orf27Q9GZN8 174 aa16.45■□□□□ 0.22
PLOD3-209ENST00000460475 WWTR1Q9GZV5 400 aa16.45■□□□□ 0.22
PLOD3-209ENST00000460475 CLMPQ9H6B4 373 aa16.45■□□□□ 0.22
PLOD3-209ENST00000460475 ZNF395Q9H8N7 513 aaPredicted RBP16.45■□□□□ 0.22
PLOD3-209ENST00000460475 KLHL1Q9NR64 748 aa16.45■□□□□ 0.22
PLOD3-209ENST00000460475 MAP10Q9P2G4 905 aa16.45■□□□□ 0.22
PLOD3-209ENST00000460475 RAP2CQ9Y3L5 183 aa16.45■□□□□ 0.22
PLOD3-209ENST00000460475 DOPEY1Q5JWR5 2465 aa16.44■□□□□ 0.22
PLOD3-209ENST00000460475 OR6B1O95007 311 aa16.44■□□□□ 0.22
PLOD3-209ENST00000460475 NADKO95544 446 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms