RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 MSX2P35548 267 aaPredicted RBP9.84□□□□□ -0.83
HERC4-207ENST00000460168 ALDH3B2P48448 385 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 SLC7A2P52569 658 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 ACTR3P61158 418 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 REEP5Q00765 189 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 CEACAM7Q14002 265 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 GPR18Q14330 331 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 KIR2DS5Q14953 304 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 TLR1Q15399 786 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 SHQ1Q6PI26 577 aaKnown RBP9.84□□□□□ -0.83
HERC4-207ENST00000460168 TSSK4Q6SA08 328 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 MICU2Q8IYU8 434 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 EID3Q8N140 333 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 CLEC4FQ8N1N0 589 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 OR4K1Q8NGD4 311 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 DNAJB14Q8TBM8 379 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 CHTF18Q8WVB6 975 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 SLC13A3Q8WWT9 602 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 FBXW5Q969U6 566 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 LIN28AQ9H9Z2 209 aaKnown RBP9.84□□□□□ -0.83
HERC4-207ENST00000460168 POT1Q9NUX5 634 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 GAB2Q9UQC2 676 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 PLXND1Q9Y4D7 1925 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 EML5Q05BV3 1969 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 A0A1W2PR77 199 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 FAM221AA4D161 298 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 B4DGG1 531 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 L7N2F9 121 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 PCDH7O60245 1069 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 BCAS1O75363 584 aaPredicted RBP9.84□□□□□ -0.83
HERC4-207ENST00000460168 TIPRLO75663 272 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 CSF2P04141 144 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 XRCC1P18887 633 aaPredicted RBP9.84□□□□□ -0.83
HERC4-207ENST00000460168 PRPS1L1P21108 318 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 PEBP1P30086 187 aaKnown RBP9.84□□□□□ -0.83
HERC4-207ENST00000460168 TIA1P31483 386 aaKnown RBP eCLIP9.84□□□□□ -0.83
HERC4-207ENST00000460168 CSNK1G2P78368 415 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 GPLD1P80108 840 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 ABATP80404 500 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 DMWDQ09019 674 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 ELOCQ15369 112 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 PGS1Q32NB8 556 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 SAMD4BQ5PRF9 694 aaKnown RBP9.84□□□□□ -0.83
HERC4-207ENST00000460168 PDSS1Q5T2R2 415 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 DHDDSQ86SQ9 333 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 PLD3Q8IV08 490 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 NAGSQ8N159 534 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 MINDY1Q8N5J2 469 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 FAM156AQ8NDB6 213 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 OR10G6Q8NH81 332 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 SLC37A2Q8TED4 501 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 GTF3AQ92664 365 aaKnown RBP9.84□□□□□ -0.83
HERC4-207ENST00000460168 ZNF566Q969W8 418 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 FCRL1Q96LA6 429 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 OR52E6Q96RD3 313 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 DPH7Q9BTV6 452 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 SLAMF8Q9P0V8 285 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 SPAG17Q6Q759 2223 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 CACNA1IQ9P0X4 2223 aa9.84□□□□□ -0.83
HERC4-207ENST00000460168 GOLGA4Q13439 2230 aaKnown RBP9.83□□□□□ -0.84
HERC4-207ENST00000460168 GSAPA4D1B5 854 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 FXYD1O00168 92 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 TRIM38O00635 465 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 PRICKLE3O43900 615 aaPredicted RBP9.83□□□□□ -0.84
HERC4-207ENST00000460168 GMDSO60547 372 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 KCNH1O95259 989 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 GBAP04062 536 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 SERPIND1P05546 499 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 NME1P15531 152 aaKnown RBP9.83□□□□□ -0.84
HERC4-207ENST00000460168 ZNF23P17027 643 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 HK1P19367 917 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 SERPINB1P30740 379 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 S100A3P33764 101 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 CARD18P57730 90 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 COPZ1P61923 177 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 RAE1P78406 368 aaKnown RBP9.83□□□□□ -0.84
HERC4-207ENST00000460168 FOXM1Q08050 763 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 SIGLEC14Q08ET2 396 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 TOP3AQ13472 1001 aaPredicted RBP9.83□□□□□ -0.84
HERC4-207ENST00000460168 RAPSNQ13702 412 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 FLOT2Q14254 428 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 MFSD13AQ14CX5 517 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 C8orf82Q6P1X6 216 aaPredicted RBP9.83□□□□□ -0.84
HERC4-207ENST00000460168 C5orf46Q6UWT4 87 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 SPATC1Q76KD6 591 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 COMMD6Q7Z4G1 85 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 HDDC2Q7Z4H3 204 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 VN1R5Q7Z5H4 357 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 EPHX4Q8IUS5 362 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 SFTPA2Q8IWL1 248 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 ADGRF3Q8IZF5 1079 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 HIPK4Q8NE63 616 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 POC1BQ8TC44 478 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 ZDHHC1Q8WTX9 485 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 FIG4Q92562 907 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 TESCQ96BS2 214 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 CCDC120Q96HB5 630 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 TMEM184CQ9NVA4 438 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 TMEM181Q9P2C4 612 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 EIF3KQ9UBQ5 218 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms