RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 SF1Q15637 639 aaKnown RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 SSX1Q16384 188 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 ZXDCQ2QGD7 858 aaPredicted RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 PLK5Q496M5 336 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 MINDY4Q4G0A6 757 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 CYP27C1Q4G0S4 372 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 FNDC3BQ53EP0 1204 aaKnown RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 CRTC2Q53ET0 693 aaPredicted RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 GPAT3Q53EU6 434 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 TMEM35AQ53FP2 167 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 EIPR1Q53HC9 387 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 ZNF311Q5JNZ3 666 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 RPS26P11Q5JNZ5 115 aaPredicted RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLC35F1Q5T1Q4 408 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 ZNF648Q5T619 568 aaPredicted RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 C1QTNF12Q5T7M4 302 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 ZNF697Q5TEC3 545 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 FAM46CQ5VWP2 391 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 LIPKQ5VXJ0 399 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 TIGD3Q6B0B8 471 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 C22orf42Q6IC83 251 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 ZNF770Q6IQ21 691 aaPredicted RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLC27A4Q6P1M0 643 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 PGBD2Q6P3X8 592 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 LIPIQ6XZB0 460 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 TMEM64Q6YI46 380 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 ZNF852Q6ZMS4 543 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 QSOX2Q6ZRP7 698 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 RFLNAQ6ZTI6 216 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 PLEKHM3Q6ZWE6 761 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 PARS2Q7L3T8 475 aaKnown RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 RTL10Q7L3V2 364 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 ARMCX6Q7L4S7 300 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 GET4Q7L5D6 327 aaPredicted RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 OTOP2Q7RTS6 562 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 C6orf120Q7Z4R8 191 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 ADCK2Q7Z695 626 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 NRARPQ7Z6K4 114 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 TECPR1Q7Z6L1 1165 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 DEFB128Q7Z7B8 93 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 LUZP2Q86TE4 346 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 TMEM150AQ86TG1 271 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 NOXA1Q86UR1 476 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 PDZD3Q86UT5 571 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 IQCHQ86VS3 1027 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 ATCAYQ86WG3 371 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 GATAD2AQ86YP4 633 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 GID4Q8IVV7 300 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 LAX1Q8IWV1 398 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 PHC2Q8IXK0 858 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 RDH10Q8IZV5 341 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLC7A5P1Q8MH63 180 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 CAMKK1Q8N5S9 505 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 HORMAD2Q8N7B1 307 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 FAM181AQ8N9Y4 354 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 KREMEN2Q8NCW0 462 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 PSD4Q8NDX1 1056 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 SRFBP1Q8NEF9 429 aaKnown RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 OR4K5Q8NGD3 323 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 OR52I1Q8NGK6 324 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 OR2A12Q8NGT7 310 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 OR6F1Q8NGZ6 308 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 OR2L2Q8NH16 312 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 TMEM163Q8TC26 289 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLC38A5Q8WUX1 472 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLC7A6Q92536 515 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 SMG7Q92540 1137 aaKnown RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 OSTF1Q92882 214 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 IRF7Q92985 503 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 EXOSC8Q96B26 276 aaKnown RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 C1GALT1C1Q96EU7 318 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 RNFT2Q96EX2 444 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 MRPL48Q96GC5 212 aaKnown RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 ZC3HAV1LQ96H79 300 aaKnown RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 SCLYQ96I15 445 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 HHIPL1Q96JK4 782 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 MSLNLQ96KJ4 702 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 LMLNQ96KR4 655 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 LRR1Q96L50 414 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 LINC00615Q96LM1 132 aaPredicted RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 ZNF582Q96NG8 517 aaPredicted RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 OR2A14Q96R47 310 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 TMEM246Q9BRR3 403 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 VN1R3Q9BXE9 311 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 PINK1Q9BXM7 581 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLC6A16Q9GZN6 736 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 SRRQ9GZT4 340 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 MIR1-1HGQ9H1L0 117 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 RHBGQ9H310 441 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 OR51I1Q9H343 314 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 RNF167Q9H6Y7 350 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 CXorf36Q9H7Y0 433 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 NIPAL2Q9H841 368 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 NT5DC2Q9H857 520 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 MARCH7Q9H992 704 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 HHATLQ9HCP6 504 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 ABCB9Q9NP78 766 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 FGF20Q9NP95 211 aaPredicted RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 TIGARQ9NQ88 270 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms