RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 NKX2-8O15522 239 aa13.2□□□□□ -0.3
LINC00887-204ENST00000456816 KRT34O76011 436 aa13.2□□□□□ -0.3
LINC00887-204ENST00000456816 ANP32DO95626 131 aa13.2□□□□□ -0.3
LINC00887-204ENST00000456816 COX6A1P12074 109 aa13.2□□□□□ -0.3
LINC00887-204ENST00000456816 LRRC74AQ0VAA2 488 aa13.2□□□□□ -0.3
LINC00887-204ENST00000456816 CDC20Q12834 499 aa13.2□□□□□ -0.3
LINC00887-204ENST00000456816 CYLC2Q14093 348 aaPredicted RBP13.2□□□□□ -0.3
LINC00887-204ENST00000456816 MPEG1Q2M385 716 aa13.2□□□□□ -0.3
LINC00887-204ENST00000456816 BTBD16Q32M84 506 aa13.2□□□□□ -0.3
LINC00887-204ENST00000456816 TMEM107Q6UX40 140 aa13.2□□□□□ -0.3
LINC00887-204ENST00000456816 DNAJC14Q6Y2X3 702 aaPredicted RBP13.2□□□□□ -0.3
LINC00887-204ENST00000456816 MSANTD1Q6ZTZ1 278 aa13.2□□□□□ -0.3
LINC00887-204ENST00000456816 NDUFAF7Q7L592 441 aa13.2□□□□□ -0.3
LINC00887-204ENST00000456816 FUNDC1Q8IVP5 155 aa13.2□□□□□ -0.3
LINC00887-204ENST00000456816 VWA5B2Q8N398 1253 aa13.2□□□□□ -0.3
LINC00887-204ENST00000456816 SUN3Q8TAQ9 357 aa13.2□□□□□ -0.3
LINC00887-204ENST00000456816 PANX1Q96RD7 426 aa13.2□□□□□ -0.3
LINC00887-204ENST00000456816 TUBB6Q9BUF5 446 aa13.2□□□□□ -0.3
LINC00887-204ENST00000456816 CCDC106Q9BWC9 280 aa13.2□□□□□ -0.3
LINC00887-204ENST00000456816 ZNF700Q9H0M5 742 aa13.2□□□□□ -0.3
LINC00887-204ENST00000456816 MYLK2Q9H1R3 596 aa13.2□□□□□ -0.3
LINC00887-204ENST00000456816 CXorf21Q9HAI6 301 aa13.2□□□□□ -0.3
LINC00887-204ENST00000456816 ZNF160Q9HCG1 818 aa13.2□□□□□ -0.3
LINC00887-204ENST00000456816 NEUROD4Q9HD90 331 aa13.2□□□□□ -0.3
LINC00887-204ENST00000456816 DDX18Q9NVP1 670 aaKnown RBP13.2□□□□□ -0.3
LINC00887-204ENST00000456816 BCAP29Q9UHQ4 241 aa13.2□□□□□ -0.3
LINC00887-204ENST00000456816 LEF1Q9UJU2 399 aaPredicted RBP13.2□□□□□ -0.3
LINC00887-204ENST00000456816 ERVK-19Q9WJR5 959 aa13.2□□□□□ -0.3
LINC00887-204ENST00000456816 MAN2B2Q9Y2E5 1009 aa13.2□□□□□ -0.3
LINC00887-204ENST00000456816 RFXANKO14593 260 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 EFSO43281 561 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 HPP00738 406 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 WT1P19544 449 aaPredicted RBP13.19□□□□□ -0.3
LINC00887-204ENST00000456816 CAPN3P20807 821 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 GALNSP34059 522 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 MC3RP41968 323 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 ZFP36L2P47974 494 aaKnown RBP13.19□□□□□ -0.3
LINC00887-204ENST00000456816 CDK9P50750 372 aaKnown RBP13.19□□□□□ -0.3
LINC00887-204ENST00000456816 UCNP55089 124 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 WNT3P56703 355 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 PHC1P78364 1004 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 MRPS35P82673 323 aaKnown RBP13.19□□□□□ -0.3
LINC00887-204ENST00000456816 PCOLCEQ15113 449 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 TERF2Q15554 542 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 CEBPEQ15744 281 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 EXT1Q16394 746 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 SLC2A7Q6PXP3 512 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 FAM111BQ6SJ93 734 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 DGAT2L6Q6ZPD8 337 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 PROSER1Q86XN7 944 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 POU5F2Q8N7G0 328 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 MORN4Q8NDC4 146 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 SLC2A12Q8TD20 617 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 PTPMT1Q8WUK0 201 aaPredicted RBP13.19□□□□□ -0.3
LINC00887-204ENST00000456816 THAP4Q8WY91 577 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 NCLNQ969V3 563 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 CMTM5Q96DZ9 223 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 FER1L6-AS2Q96M78 137 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 CCDC115Q96NT0 180 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 C3orf14Q9HBI5 128 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 TAS2R9Q9NYW1 312 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 MAT2BQ9NZL9 334 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 BTNL2Q9UIR0 455 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 VPS4AQ9UN37 437 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 POLHQ9Y253 713 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 NDUFAF1Q9Y375 327 aa13.19□□□□□ -0.3
LINC00887-204ENST00000456816 A0A1W2PP18 115 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 BBIP1A8MTZ0 92 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 HAX1O00165 279 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 SLITRK5O94991 958 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 CT62P0C5K7 136 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 COX4I1P13073 169 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 FRKP42685 505 aaPredicted RBP13.18□□□□□ -0.3
LINC00887-204ENST00000456816 PRKAG1P54619 331 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 RRADP55042 308 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 TMPRSS3P57727 454 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 SLC26A5P58743 744 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 TLE3Q04726 772 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 STX5Q13190 355 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 EXOSC7Q15024 291 aaKnown RBP13.18□□□□□ -0.3
LINC00887-204ENST00000456816 MLC1Q15049 377 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 SPRED3Q2MJR0 410 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 PRICKLE4Q2TBC4 344 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 ZNF628Q5EBL2 1059 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 IRAK1BP1Q5VVH5 260 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 CPZQ66K79 652 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 RNF111Q6ZNA4 994 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 ZNF621Q6ZSS3 439 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 TRIML2Q8N7C3 387 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 CLEC1AQ8NC01 280 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 B3GNT7Q8NFL0 401 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 RP9Q8TA86 221 aaKnown RBP13.18□□□□□ -0.3
LINC00887-204ENST00000456816 ZNF675Q8TD23 568 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 ADAMTS17Q8TE56 1095 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 TSPEARQ8WU66 669 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 SENP5Q96HI0 755 aaPredicted RBP13.18□□□□□ -0.3
LINC00887-204ENST00000456816 FBXL20Q96IG2 436 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 INPP5KQ9BT40 448 aa13.18□□□□□ -0.3
LINC00887-204ENST00000456816 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.18□□□□□ -0.3
LINC00887-204ENST00000456816 SCN2AQ99250 2005 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms