RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 GRAMD2AQ8IUY3 354 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 RIMKLAQ8IXN7 391 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 TRAM1L1Q8N609 369 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 HORMAD2Q8N7B1 307 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 OR5H6Q8NGV6 325 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 PDLIM5Q96HC4 596 aaKnown RBP10.62□□□□□ -0.71
DDR1-240ENST00000454612 ACOT13Q9NPJ3 140 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 CLEC2DQ9UHP7 191 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 ZNF222Q9UK12 451 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 CORO2BQ9UQ03 480 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 ZNF780BQ9Y6R6 833 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 HEPACAM2A8MVW5 462 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 LRRTM2O43300 516 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 PRKNO60260 465 aaPredicted RBP10.62□□□□□ -0.71
DDR1-240ENST00000454612 ENTPD6O75354 484 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 NUDT14O95848 222 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 ZNF30P17039 623 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 CELP19835 753 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 KELP23276 732 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 PTX3P26022 381 aaPredicted RBP10.62□□□□□ -0.71
DDR1-240ENST00000454612 CSTF2P33240 577 aaKnown RBP eCLIP10.62□□□□□ -0.71
DDR1-240ENST00000454612 SELENOWP63302 87 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 IL18Q14116 193 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 CCNJQ5T5M9 372 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 GEMIN6Q8WXD5 167 aaKnown RBP10.62□□□□□ -0.71
DDR1-240ENST00000454612 TADA1Q96BN2 335 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 C16orf58Q96GQ5 468 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 UHRF1Q96T88 793 aaPredicted RBP10.62□□□□□ -0.71
DDR1-240ENST00000454612 ASPNQ9BXN1 380 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 OR2B2Q9GZK3 357 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 OR51I1Q9H343 314 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 SLC35C2Q9NQQ7 365 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 TMEM9Q9P0T7 183 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 CLCA3PQ9Y6N3 262 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 A8MUA0 341 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 C1orf105O95561 183 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 CA3P07451 260 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 POLR2CP19387 275 aaPredicted RBP10.62□□□□□ -0.71
DDR1-240ENST00000454612 CXCR2P25025 360 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 CCR8P51685 355 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 SLAMF1Q13291 335 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 ZNF234Q14588 700 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 ZXDCQ2QGD7 858 aaPredicted RBP10.62□□□□□ -0.71
DDR1-240ENST00000454612 CCDC157Q569K6 752 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 PRSS36Q5K4E3 855 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 ATAT1Q5SQI0 421 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 ALG14Q96F25 216 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 ZBED6CLQ96FA7 236 aaPredicted RBP10.62□□□□□ -0.71
DDR1-240ENST00000454612 FAIM2Q9BWQ8 316 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 LGR4Q9BXB1 951 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 UCK2Q9BZX2 261 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 TRIM45Q9H8W5 580 aaPredicted RBP10.62□□□□□ -0.71
DDR1-240ENST00000454612 TMPRSS11EQ9UL52 423 aa10.62□□□□□ -0.71
DDR1-240ENST00000454612 UPK1AO00322 258 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 ADRB3P13945 408 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 NPPBP16860 134 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 DCKP27707 260 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 SLC9A5Q14940 896 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 DEFB110Q30KQ9 67 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 OR2G6Q5TZ20 316 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 ZNF783Q6ZMS7 281 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 OR10H4Q8NGA5 316 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 OR51A7Q8NH64 312 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 GGHQ92820 318 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 TRIM43Q96BQ3 446 aaPredicted RBP10.61□□□□□ -0.71
DDR1-240ENST00000454612 LRR1Q96L50 414 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 NECTIN4Q96NY8 510 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 YTHDF1Q9BYJ9 559 aaKnown RBP10.61□□□□□ -0.71
DDR1-240ENST00000454612 MTIF3Q9H2K0 278 aaKnown RBP10.61□□□□□ -0.71
DDR1-240ENST00000454612 DSN1Q9H410 356 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 PHPT1Q9NRX4 125 aaPredicted RBP10.61□□□□□ -0.71
DDR1-240ENST00000454612 ANKMY1Q9P2S6 941 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 SLC23A2Q9UGH3 650 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 ENPP5Q9UJA9 477 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 NDRG2Q9UN36 371 aaKnown RBP10.61□□□□□ -0.71
DDR1-240ENST00000454612 OR51B4Q9Y5P0 310 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 CDH23Q9H251 3354 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 NTN1O95631 604 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 NFATC1O95644 943 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 RPN2P04844 631 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 S100A9P06702 114 aaKnown RBP10.61□□□□□ -0.71
DDR1-240ENST00000454612 PRR35P0CG20 571 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 MNX1P50219 401 aaPredicted RBP10.61□□□□□ -0.71
DDR1-240ENST00000454612 PGDP52209 483 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 HNRNPFP52597 415 aaKnown RBP10.61□□□□□ -0.71
DDR1-240ENST00000454612 RACK1P63244 317 aaKnown RBP10.61□□□□□ -0.71
DDR1-240ENST00000454612 ZNF311Q5JNZ3 666 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 ZDHHC20Q5W0Z9 365 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 RASSF6Q6ZTQ3 369 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 ENTHD1Q8IYW4 607 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 GATSQ8NAP1 163 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 VN1R2Q8NFZ6 395 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 SLC38A4Q969I6 547 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 ARRDC3Q96B67 414 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 ZNF300Q96RE9 604 aaPredicted RBP10.61□□□□□ -0.71
DDR1-240ENST00000454612 TSSK6Q9BXA6 273 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 ALOXE3Q9BYJ1 711 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 CXorf36Q9H7Y0 433 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 SERHLQ9NQF3 203 aa10.61□□□□□ -0.71
DDR1-240ENST00000454612 ING3Q9NXR8 418 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms