RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 SPPL2AQ8TCT8 520 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 CNDP2Q96KP4 475 aaKnown RBP10.12□□□□□ -0.79
PKP4-206ENST00000452162 SARGQ9BW04 601 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 KLHL31Q9H511 634 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 NEUROD4Q9HD90 331 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 A4GALTQ9NPC4 353 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 THSD1Q9NS62 852 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 EXD2Q9NVH0 621 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 TRNAU1APQ9NX07 287 aaKnown RBP10.12□□□□□ -0.79
PKP4-206ENST00000452162 TAS2R7Q9NYW3 318 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 NLGN3Q9NZ94 848 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 C5AR2Q9P296 337 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 CDC14AQ9UNH5 594 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 SNX8Q9Y5X2 465 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 LYVE1Q9Y5Y7 322 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 HEBP2Q9Y5Z4 205 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 UNC13CQ8NB66 2214 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 A0A0G2JN53 185 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 SPAARA0A1B0GVQ0 90 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 C4orf51C9J302 202 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 EML2O95834 649 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 CEACAM1P13688 526 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 HOXB3P14651 431 aaPredicted RBP10.12□□□□□ -0.79
PKP4-206ENST00000452162 DCKP27707 260 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 GSTM2P28161 218 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 PLA2G16P53816 162 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 CDK5R2Q13319 367 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 DYNC1I2Q13409 638 aaKnown RBP10.12□□□□□ -0.79
PKP4-206ENST00000452162 TRIP6Q15654 476 aaKnown RBP10.12□□□□□ -0.79
PKP4-206ENST00000452162 INAVAQ3KP66 663 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 HORMAD2Q8N7B1 307 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 SETD9Q8NE22 299 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 OR4C15Q8NGM1 316 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 OR13F1Q8NGS4 319 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 ZNF420Q8TAQ5 688 aaPredicted RBP10.12□□□□□ -0.79
PKP4-206ENST00000452162 GPBAR1Q8TDU6 330 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 LZICQ8WZA0 190 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 UCN3Q969E3 161 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 EXOSC8Q96B26 276 aaKnown RBP10.12□□□□□ -0.79
PKP4-206ENST00000452162 ZNF300Q96RE9 604 aaPredicted RBP10.12□□□□□ -0.79
PKP4-206ENST00000452162 ZNF347Q96SE7 839 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 DOK1Q99704 481 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 C17orf62Q9BQA9 187 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 DPH7Q9BTV6 452 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 KRT84Q9NSB2 600 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 ACSS1Q9NUB1 689 aaPredicted RBP10.12□□□□□ -0.79
PKP4-206ENST00000452162 KIF17Q9P2E2 1029 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 TBC1D29Q9UFV1 150 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 BLOC1S6Q9UL45 172 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 NDRG4Q9ULP0 352 aaKnown RBP10.12□□□□□ -0.79
PKP4-206ENST00000452162 DOLKQ9UPQ8 538 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 NAALAD2Q9Y3Q0 740 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 HSPE1-MOB4S4R3N1 261 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 ADAMDEC1O15204 470 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 LDOC1O95751 146 aaPredicted RBP10.11□□□□□ -0.79
PKP4-206ENST00000452162 IFNA14P01570 189 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 SERPIND1P05546 499 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 CCDC159P0C7I6 412 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 CYP4B1P13584 511 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 AHRP35869 848 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 SSR2P43308 183 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 MLC1Q15049 377 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 ZNF425Q6IV72 752 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 CEACAM20Q6UY09 585 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 WASH2PQ6VEQ5 465 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 GKN2Q86XP6 184 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 SPARTQ8N0X7 666 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 TTC29Q8NA56 475 aaPredicted RBP10.11□□□□□ -0.79
PKP4-206ENST00000452162 ATG16L2Q8NAA4 619 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 CNIH3Q8TBE1 160 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 GEMIN6Q8WXD5 167 aaKnown RBP10.11□□□□□ -0.79
PKP4-206ENST00000452162 C12orf43Q96C57 262 aaKnown RBP10.11□□□□□ -0.79
PKP4-206ENST00000452162 MS4A6EQ96DS6 147 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 ZBED6CLQ96FA7 236 aaPredicted RBP10.11□□□□□ -0.79
PKP4-206ENST00000452162 PITX2Q99697 317 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 GABARAPL3Q9BY60 117 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 RUBCNLQ9H714 662 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 SYNPO2LQ9H987 977 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 LIN28AQ9H9Z2 209 aaKnown RBP10.11□□□□□ -0.79
PKP4-206ENST00000452162 FANCEQ9HB96 536 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 PAK1IP1Q9NWT1 392 aaPredicted RBP10.11□□□□□ -0.79
PKP4-206ENST00000452162 EHD3Q9NZN3 535 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 FTSJ1Q9UET6 329 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 TESMINQ9Y4I5 508 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 LY6G6EA0A0G2JKS1 128 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 PRAMEF10O60809 474 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 SEC14L2O76054 403 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 RECKO95980 971 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 STATHP02808 62 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 ALPPL2P10696 532 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 DRD2P14416 443 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 EPHA2P29317 976 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 GRK3P35626 688 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 OR1E2P47887 323 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 RPS26P62854 115 aaKnown RBP10.11□□□□□ -0.79
PKP4-206ENST00000452162 IL5RAQ01344 420 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 IL1RL1Q01638 556 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 ILF3Q12906 894 aaKnown RBP eCLIP10.11□□□□□ -0.791e-6■■■■□ 19.5
PKP4-206ENST00000452162 HSPB3Q12988 150 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 PROX2Q3B8N5 592 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms