RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 MC2RQ01718 297 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 VEZF1Q14119 521 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 DOCK1Q14185 1865 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 TAF1CQ15572 869 aaPredicted RBP8.19□□□□□ -1.1
LSM5-208ENST00000450169 C18orf21Q32NC0 220 aaPredicted RBP8.19□□□□□ -1.1
LSM5-208ENST00000450169 PAN3Q58A45 887 aaKnown RBP8.19□□□□□ -1.1
LSM5-208ENST00000450169 ATAT1Q5SQI0 421 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 SFRP5Q5T4F7 317 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 HES5Q5TA89 166 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 SLC27A1Q6PCB7 646 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 SLC16A13Q7RTY0 426 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 CHCHD4Q8N4Q1 142 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 C12orf45Q8N5I9 185 aaPredicted RBP8.19□□□□□ -1.1
LSM5-208ENST00000450169 KDF1Q8NAX2 398 aaPredicted RBP8.19□□□□□ -1.1
LSM5-208ENST00000450169 ADAMTS14Q8WXS8 1223 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 CNOT9Q92600 299 aaKnown RBP8.19□□□□□ -1.1
LSM5-208ENST00000450169 DOHHQ9BU89 302 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 SLC39A8Q9C0K1 460 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 SPRTNQ9H040 489 aaPredicted RBP8.19□□□□□ -1.1
LSM5-208ENST00000450169 IPPKQ9H8X2 491 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 C11orf16Q9NQ32 467 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 ENAMQ9NRM1 1142 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 EPHA6Q9UF33 1036 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 RPL36Q9Y3U8 105 aaKnown RBP8.19□□□□□ -1.1
LSM5-208ENST00000450169 SLC22A7Q9Y694 548 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 ANKRD36A6QL64 1941 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 PLSCR5A0PG75 271 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 ANKDD1BA6NHY2 528 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 YJEFN3A6XGL0 299 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 TLR4O00206 839 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 LRRTM2O43300 516 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 BEST1O76090 585 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 ATG12O94817 140 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 HTR3BO95264 441 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 S100A9P06702 114 aaKnown RBP8.19□□□□□ -1.1
LSM5-208ENST00000450169 GPX2P18283 190 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 ELK1P19419 428 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 AHCYP23526 432 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 ITGB8P26012 769 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 GIFP27352 417 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 FGF9P31371 208 aaPredicted RBP8.19□□□□□ -1.1
LSM5-208ENST00000450169 RORAP35398 523 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 RFC3P40938 356 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 CRISP1P54107 249 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 SNRPGP62308 76 aaKnown RBP8.19□□□□□ -1.1
LSM5-208ENST00000450169 FABP5Q01469 135 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 DHODHQ02127 395 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 ACVR1Q04771 509 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 ITKQ08881 620 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 CRHR2Q13324 411 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 SERTAD2Q14140 314 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 TAF1AQ15573 450 aaPredicted RBP8.19□□□□□ -1.1
LSM5-208ENST00000450169 CHRNA6Q15825 494 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 MPPE1Q53F39 396 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 SGO1Q5FBB7 561 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 SIRPB2Q5JXA9 342 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 PRAMEF19Q5SWL8 479 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 B3GNTL1Q67FW5 361 aaPredicted RBP8.19□□□□□ -1.1
LSM5-208ENST00000450169 SLC25A25Q6KCM7 469 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 CCDC116Q8IYX3 515 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 TRPV1Q8NER1 839 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 OR4L1Q8NH43 312 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 NELL1Q92832 810 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 PGAP3Q96FM1 320 aaPredicted RBP8.19□□□□□ -1.1
LSM5-208ENST00000450169 IMP4Q96G21 291 aaKnown RBP8.19□□□□□ -1.1
LSM5-208ENST00000450169 RBM14Q96PK6 669 aaKnown RBP8.19□□□□□ -1.1
LSM5-208ENST00000450169 PDCD10Q9BUL8 212 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 PTDSS2Q9BVG9 487 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 GAREM1Q9H706 876 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 IL21Q9HBE4 155 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 SPHK1Q9NYA1 384 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 HACL1Q9UJ83 578 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 IGKV6-21A0A0C4DH24 114 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 CCDC85CA6NKD9 419 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 GABRR3A8MPY1 467 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 EEF1E1O43324 174 aaKnown RBP8.18□□□□□ -1.1
LSM5-208ENST00000450169 GREM1O60565 184 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 ULK1O75385 1050 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 RP2O75695 350 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 RPP40O75818 363 aaKnown RBP8.18□□□□□ -1.1
LSM5-208ENST00000450169 SIX6O95475 246 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 PRSS56P0CW18 603 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 UGT2B7P16662 529 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 TNFRSF1BP20333 461 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 PVALBP20472 110 aaPredicted RBP8.18□□□□□ -1.1
LSM5-208ENST00000450169 ATP5A1P25705 553 aaKnown RBP8.18□□□□□ -1.1
LSM5-208ENST00000450169 ACADLP28330 430 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 SLC6A4P31645 630 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 ACSL1P33121 698 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 KCNJ3P48549 501 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 SRP9P49458 86 aaKnown RBP8.18□□□□□ -1.1
LSM5-208ENST00000450169 MAP4K2Q12851 820 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 PCBP2Q15366 365 aaKnown RBP eCLIP8.18□□□□□ -1.1
LSM5-208ENST00000450169 ZSWIM7Q19AV6 140 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 TMEM201Q5SNT2 666 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 MACC1Q6ZN28 852 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 TRIM46Q7Z4K8 759 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 C12orf40Q86WS4 652 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 BMPERQ8N8U9 685 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 ZNF527Q8NB42 609 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms