RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 BEND2Q8NDZ0 799 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 DENND6BQ8NEG7 585 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 MCPH1Q8NEM0 835 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 OR56B2PQ8NGI1 322 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 OR8D4Q8NGM9 314 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 OR5M3Q8NGP4 307 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 OR9A1PQ8NGU1 263 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 AKR7LQ8NHP1 331 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 MOSPD2Q8NHP6 518 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 RNASE11Q8TAA1 199 aaKnown RBP3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC35B2Q8TB61 432 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 FAM45AQ8TCE6 357 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 ST7LQ8TDW4 575 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC5A11Q8WWX8 675 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 STAMQ92783 540 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 ZBTB8AQ96BR9 441 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 RHBDF1Q96CC6 855 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 LGALS12Q96DT0 336 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 AURKBQ96GD4 344 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 AJUBAQ96IF1 538 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 BOD1Q96IK1 185 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 PRMT6Q96LA8 375 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 LURAP1Q96LR2 239 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 PWWP2AQ96N64 755 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 LRFN5Q96NI6 719 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 LENG8Q96PV6 779 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 HBEGFQ99075 208 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 TREX2Q9BQ50 279 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 ZNF559Q9BR84 538 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 MESP1Q9BRJ9 268 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 MARVELD1Q9BSK0 173 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 COPS4Q9BT78 406 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 EDEM2Q9BV94 578 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 SPATA5L1Q9BVQ7 753 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 ADGRE3Q9BY15 652 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 SRRQ9GZT4 340 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 MS4A7Q9GZW8 240 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 PCDHAC1Q9H158 963 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 OR10A2Q9H208 303 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 SMOC2Q9H3U7 446 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 PRDM13Q9H4Q3 707 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 NSUN3Q9H649 340 aaKnown RBP3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 NOL11Q9H8H0 719 aaKnown RBP3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 WDR41Q9HAD4 459 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 PCDH9Q9HC56 1237 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 SPAG4Q9NPE6 437 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 IL26Q9NPH9 171 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 HEYLQ9NQ87 328 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 XPNPEP3Q9NQH7 507 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 NIT2Q9NQR4 276 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 IMPAD1Q9NX62 359 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 TEX10Q9NXF1 929 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 FAM30AQ9NZY2 134 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 SERGEFQ9UGK8 458 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 APOBEC3BQ9UH17 382 aaKnown RBP3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 DCDC2Q9UHG0 476 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 PHF11Q9UIL8 331 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 ING1Q9UK53 422 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 TRPC5Q9UL62 973 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 STAP1Q9ULZ2 295 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 ABCG2Q9UNQ0 655 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 RUVBL2Q9Y230 463 aaKnown RBP3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 PDE10AQ9Y233 779 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 DRG1Q9Y295 367 aaKnown RBP3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 PADI2Q9Y2J8 665 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 MRPS18CQ9Y3D5 142 aaKnown RBP3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 BTAF1O14981 1849 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 COL11A2P13942 1736 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 GLI3P10071 1580 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 LOC102723971A0A1B0GUV8 181 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 MEX3AA1L020 520 aaKnown RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 ASB14A6NK59 587 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 ZNF785A8K8V0 405 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 A8MV72 311 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 E9PLN8 166 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 G3V3Q6 166 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 RAB27BO00194 218 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 UPK1AO00322 258 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC1A7O00341 560 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC16A3O15427 465 aaKnown RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 PPIHO43447 177 aaKnown RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 DPM1O60762 260 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 VPS26AO75436 327 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC22A3O75751 556 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 GADD45GO95257 159 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 RAB3DO95716 219 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 LATS1O95835 1130 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 GLP2RO95838 553 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 ANGPTL1O95841 491 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 LGI1O95970 557 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 OTCP00480 354 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 MBP02144 154 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 C9P02748 559 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 PLA2G1BP04054 148 aaKnown RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 CHRNGP07510 517 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 CHRM5P08912 532 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 SNRPA1P09661 255 aaKnown RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 SBK2P0C263 348 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 CBSLP0DN79 551 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms