RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 PCDHGA7Q9Y5G6 932 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 AK5Q9Y6K8 562 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 IGKV3D-11A0A0A0MRZ8 115 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 TRBV5-3A0A0A0MS03 114 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 RAD1O60671 282 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 NPPAP01160 153 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 C1QCP02747 245 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 HOXB9P17482 250 aaPredicted RBP13.69□□□□□ -0.22
TNF-208ENST00000449264 TCN2P20062 427 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 CHI3L1P36222 383 aaPredicted RBP13.69□□□□□ -0.22
TNF-208ENST00000449264 STT3AP46977 705 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 SLC7A2P52569 658 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 SELPLGQ14242 412 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 RABL3Q5HYI8 236 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 C6orf163Q5TEZ5 329 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 DGAT2L6Q6ZPD8 337 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 LANCL3Q6ZV70 420 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 GALNT12Q8IXK2 581 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 ANKRD27Q96NW4 1050 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 TRIM4Q9C037 500 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 ANKRA2Q9H9E1 313 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 SPAG4Q9NPE6 437 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 WDR70Q9NW82 654 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 ADA2Q9NZK5 511 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 KLK13Q9UKR3 277 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 PACSIN3Q9UKS6 424 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 AKAP13Q12802 2813 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 TCRBV16S1A1N1A0A5B0 115 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 A8MUA0 341 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 CDRT15L2A8MXV6 281 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 ANKRD65E5RJM6 399 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 BRINP1O60477 761 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 ALOX12BO75342 701 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 TNNI3P19429 210 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 SPINK2P20155 84 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 SLC6A2P23975 617 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 PLA2G5P39877 138 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 PGDP52209 483 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 EMP2P54851 167 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 TP53BP2Q13625 1128 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 ZNF628Q5EBL2 1059 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 NANOGP8Q6NSW7 305 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 C8orf82Q6P1X6 216 aaPredicted RBP13.69□□□□□ -0.22
TNF-208ENST00000449264 FAM111BQ6SJ93 734 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 BNC2Q6ZN30 1099 aaPredicted RBP13.69□□□□□ -0.22
TNF-208ENST00000449264 METTL21AQ8WXB1 218 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 RIT1Q92963 219 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 MCUR1Q96AQ8 359 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 FAM120BQ96EK7 910 aaKnown RBP13.69□□□□□ -0.22
TNF-208ENST00000449264 HOPXQ9BPY8 73 aaPredicted RBP13.69□□□□□ -0.22
TNF-208ENST00000449264 GPATCH1Q9BRR8 931 aaKnown RBP13.69□□□□□ -0.22
TNF-208ENST00000449264 THTPAQ9BU02 230 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 B3GNT4Q9C0J1 378 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 NRSN2Q9GZP1 204 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 IKZF5Q9H5V7 419 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 NANOGQ9H9S0 305 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 TPT1P8Q9HAU6 139 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 ASCL3Q9NQ33 180 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 ZCCHC3Q9NUD5 404 aaKnown RBP13.69□□□□□ -0.22
TNF-208ENST00000449264 DDX18Q9NVP1 670 aaKnown RBP13.69□□□□□ -0.22
TNF-208ENST00000449264 MAT2BQ9NZL9 334 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 PADI2Q9Y2J8 665 aa13.69□□□□□ -0.22
TNF-208ENST00000449264 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.69□□□□□ -0.22
TNF-208ENST00000449264 CEP295Q9C0D2 2601 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 ASPMQ8IZT6 3477 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 C15orf38-AP3S2A0A0A6YYH1 394 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 C17orf105B2RV13 164 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 CT62P0C5K7 136 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 ZCCHC18P0CG32 403 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 UQCRC2P22695 453 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 FOLR3P41439 243 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 CCT3P49368 545 aaKnown RBP13.68□□□□□ -0.22
TNF-208ENST00000449264 PRKAG1P54619 331 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 CASP9P55211 416 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 RPS18P62269 152 aaKnown RBP13.68□□□□□ -0.22
TNF-208ENST00000449264 CAMK2BQ13554 666 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 MAP7Q14244 749 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 PUM1Q14671 1186 aaKnown RBP eCLIP13.68□□□□□ -0.22
TNF-208ENST00000449264 PRICKLE4Q2TBC4 344 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 RUNDC3AQ59EK9 446 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 CPZQ66K79 652 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 ASRGL1Q7L266 308 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 ARPINQ7Z6K5 226 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 RNF148Q8N7C7 305 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 PLPP5Q8NEB5 264 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 OR7G2Q8NG99 324 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 PSMA8Q8TAA3 256 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 ZFP90Q8TF47 636 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 ELP4Q96EB1 424 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 PHF12Q96QT6 1004 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 CDRT15Q96T59 188 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 CPPED1Q9BRF8 314 aaPredicted RBP13.68□□□□□ -0.22
TNF-208ENST00000449264 MESP1Q9BRJ9 268 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 PELOQ9BRX2 385 aaKnown RBP13.68□□□□□ -0.22
TNF-208ENST00000449264 THUMPD3Q9BV44 507 aaKnown RBP13.68□□□□□ -0.22
TNF-208ENST00000449264 CNPPD1Q9BV87 410 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 CADM1Q9BY67 442 aaKnown RBP13.68□□□□□ -0.22
TNF-208ENST00000449264 EQTNQ9NQ60 294 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 THSD1Q9NS62 852 aa13.68□□□□□ -0.22
TNF-208ENST00000449264 L3MBTL1Q9Y468 752 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms