RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 SH2D4BQ5SQS7 431 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 KANK2Q63ZY3 851 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 SLC48A1Q6P1K1 146 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 NUDCD3Q8IVD9 361 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 GALNT12Q8IXK2 581 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 DDIASQ8IXT1 998 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 MMP21Q8N119 569 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 TMEM156Q8N614 296 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 HORMAD2Q8N7B1 307 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 ZNF321PQ8N8H1 164 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 OR4K14Q8NGD5 310 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 DOK4Q8TEW6 326 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 RIT1Q92963 219 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 SIGLEC12Q96PQ1 595 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 KLHL1Q9NR64 748 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.53□□□□□ -0.24
USP39-206ENST00000448971 LRFN1Q9P244 771 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 ERVK-19Q9WJR5 959 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 POLR3HQ9Y535 204 aaPredicted RBP13.53□□□□□ -0.24
USP39-206ENST00000448971 PTGDR2Q9Y5Y4 395 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 ACTL7BQ9Y614 415 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 A0A1W2PS29 197 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 SERTM1A2A2V5 107 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 WDR91A4D1P6 747 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 TMEM233B4DJY2 109 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 RGS14O43566 566 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 PRKNO60260 465 aaPredicted RBP13.52□□□□□ -0.25
USP39-206ENST00000448971 ZWINTO95229 277 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 ANXA4P09525 319 aaPredicted RBP13.52□□□□□ -0.25
USP39-206ENST00000448971 SLC35E2P0CK97 266 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 CD46P15529 392 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 NT5EP21589 574 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 CD96P40200 585 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 CYB561P49447 251 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 SSR4P51571 173 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 GPR143P51810 404 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 PER3P56645 1201 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 RAE1P78406 368 aaKnown RBP13.52□□□□□ -0.25
USP39-206ENST00000448971 ZNF763Q0D2J5 394 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 ZNF267Q14586 743 aaPredicted RBP13.52□□□□□ -0.25
USP39-206ENST00000448971 ARL13AQ5H913 290 aaPredicted RBP13.52□□□□□ -0.25
USP39-206ENST00000448971 RNF111Q6ZNA4 994 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 DGAT2L6Q6ZPD8 337 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 ANKRD42Q8N9B4 389 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 TMEM178AQ8NBL3 297 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 MDS2Q8NDY4 140 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 ZNF721Q8TF20 911 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 TWIST2Q8WVJ9 160 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 TMEM125Q96AQ2 219 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 TM4SF18Q96CE8 201 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 FBXL20Q96IG2 436 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 GAL3ST4Q96RP7 486 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 SLX1AQ9BQ83 275 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 LIN28AQ9H9Z2 209 aaKnown RBP13.52□□□□□ -0.25
USP39-206ENST00000448971 DLGAP4Q9Y2H0 992 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 ZFHX3Q15911 3703 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 AKAP9Q99996 3911 aa13.52□□□□□ -0.25
USP39-206ENST00000448971 HRKO00198 91 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 WWP2O00308 870 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 SLC28A1O00337 649 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 SLC25A12O75746 678 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 OR2J2O76002 312 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 RASAL1O95294 804 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 HSPA4LO95757 839 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 CPMP14384 443 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 GSTM5P46439 218 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 XKP51811 444 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 HK2P52789 917 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 RPL38P63173 70 aaKnown RBP13.51□□□□□ -0.25
USP39-206ENST00000448971 RNF4P78317 190 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 CASP8Q14790 479 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 HEPACAMQ14CZ8 416 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 CHI3L2Q15782 390 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 TNFAIP8L3Q5GJ75 292 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 ZNF468Q5VIY5 522 aaPredicted RBP13.51□□□□□ -0.25
USP39-206ENST00000448971 ZNF324BQ6AW86 544 aaPredicted RBP13.51□□□□□ -0.25
USP39-206ENST00000448971 SPINK14Q6IE38 97 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 RPUSD3Q6P087 351 aaKnown RBP13.51□□□□□ -0.25
USP39-206ENST00000448971 C16orf47Q6ZP98 133 aaPredicted RBP13.51□□□□□ -0.25
USP39-206ENST00000448971 SLC29A4Q7RTT9 530 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 TRIM46Q7Z4K8 759 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 HOMEZQ8IX15 550 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 CYP4Z2PQ8N1L4 340 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 BCORP1Q8N888 145 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 FAM98AQ8NCA5 519 aaKnown RBP13.51□□□□□ -0.25
USP39-206ENST00000448971 OR5L2Q8NGL0 311 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 C16orf78Q8WTQ4 265 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 ASB15Q8WXK1 588 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 SENP5Q96HI0 755 aaPredicted RBP13.51□□□□□ -0.25
USP39-206ENST00000448971 PAIP2Q9BPZ3 127 aaKnown RBP13.51□□□□□ -0.25
USP39-206ENST00000448971 HES7Q9BYE0 225 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 BRINP2Q9C0B6 783 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 GIMAP4Q9NUV9 329 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 OLAHQ9NV23 265 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 ARGLU1Q9NWB6 273 aaPredicted RBP13.51□□□□□ -0.25
USP39-206ENST00000448971 MYOTQ9UBF9 498 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 UTS2RQ9UKP6 389 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 PSME2Q9UL46 239 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 ERVK-11Q9UQG0 969 aa13.51□□□□□ -0.25
USP39-206ENST00000448971 ZNF780BQ9Y6R6 833 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms