RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 IL18BPO95998 194 aa22.31■■□□□ 1.16
PMS1-214ENST00000446877 STMN1P16949 149 aa22.31■■□□□ 1.16
PMS1-214ENST00000446877 NKX6-1P78426 367 aaPredicted RBP22.31■■□□□ 1.16
PMS1-214ENST00000446877 SHEQ5VZ18 495 aa22.31■■□□□ 1.16
PMS1-214ENST00000446877 TMEM64Q6YI46 380 aa22.31■■□□□ 1.16
PMS1-214ENST00000446877 MCMBPQ9BTE3 642 aa22.31■■□□□ 1.16
PMS1-214ENST00000446877 ZNF395Q9H8N7 513 aaPredicted RBP22.31■■□□□ 1.16
PMS1-214ENST00000446877 CALHM2Q9HA72 323 aa22.31■■□□□ 1.16
PMS1-214ENST00000446877 SNX15Q9NRS6 342 aa22.31■■□□□ 1.16
PMS1-214ENST00000446877 C15orf41Q9Y2V0 281 aa22.31■■□□□ 1.16
PMS1-214ENST00000446877 TMED10P49755 219 aaKnown RBP22.3■■□□□ 1.16
PMS1-214ENST00000446877 FBXW4P57775 412 aa22.3■■□□□ 1.16
PMS1-214ENST00000446877 RCAN2Q14206 197 aa22.3■■□□□ 1.16
PMS1-214ENST00000446877 E2F2Q14209 437 aa22.3■■□□□ 1.16
PMS1-214ENST00000446877 FASTKD3Q14CZ7 662 aaKnown RBP22.3■■□□□ 1.16
PMS1-214ENST00000446877 SLC35F6Q8N357 371 aa22.3■■□□□ 1.16
PMS1-214ENST00000446877 ZCCHC7Q8N3Z6 543 aaKnown RBP22.3■■□□□ 1.16
PMS1-214ENST00000446877 ABTB1Q969K4 478 aaPredicted RBP22.3■■□□□ 1.16
PMS1-214ENST00000446877 TP53INP1Q96A56 240 aa22.3■■□□□ 1.16
PMS1-214ENST00000446877 SECISBP2Q96T21 854 aaKnown RBP22.3■■□□□ 1.16
PMS1-214ENST00000446877 ANGPTL4Q9BY76 406 aa22.3■■□□□ 1.16
PMS1-214ENST00000446877 WDR41Q9HAD4 459 aa22.3■■□□□ 1.16
PMS1-214ENST00000446877 NPFFR2Q9Y5X5 522 aa22.3■■□□□ 1.16
PMS1-214ENST00000446877 MPDZO75970 2070 aa22.29■■□□□ 1.16
PMS1-214ENST00000446877 MBD3L4A6NDZ8 208 aaPredicted RBP22.29■■□□□ 1.16
PMS1-214ENST00000446877 MBD3L3A6NE82 208 aaPredicted RBP22.29■■□□□ 1.16
PMS1-214ENST00000446877 MBD3L5A6NJ08 208 aaPredicted RBP22.29■■□□□ 1.16
PMS1-214ENST00000446877 ARHGEF9O43307 516 aa22.29■■□□□ 1.16
PMS1-214ENST00000446877 ERN1O75460 977 aaKnown RBP22.29■■□□□ 1.16
PMS1-214ENST00000446877 PRKRAO75569 313 aaKnown RBP22.29■■□□□ 1.16
PMS1-214ENST00000446877 PIAS1O75925 651 aa22.29■■□□□ 1.16
PMS1-214ENST00000446877 BMP7P18075 431 aa22.29■■□□□ 1.16
PMS1-214ENST00000446877 GCKP35557 465 aa22.29■■□□□ 1.16
PMS1-214ENST00000446877 NRG3P56975 720 aa22.29■■□□□ 1.16
PMS1-214ENST00000446877 DR1Q01658 176 aa22.29■■□□□ 1.16
PMS1-214ENST00000446877 PCDH1Q08174 1060 aa22.29■■□□□ 1.16
PMS1-214ENST00000446877 POU4F3Q15319 338 aa22.29■■□□□ 1.16
PMS1-214ENST00000446877 NHSL2Q5HYW2 709 aa22.29■■□□□ 1.16
PMS1-214ENST00000446877 BICRALQ6AI39 1079 aa22.29■■□□□ 1.16
PMS1-214ENST00000446877 CAPN12Q6ZSI9 719 aa22.29■■□□□ 1.16
PMS1-214ENST00000446877 KLHL7Q8IXQ5 586 aa22.29■■□□□ 1.16
PMS1-214ENST00000446877 HUS1BQ8NHY5 278 aa22.29■■□□□ 1.16
PMS1-214ENST00000446877 MBD3L2Q8NHZ7 208 aaPredicted RBP22.29■■□□□ 1.16
PMS1-214ENST00000446877 STAG3L4Q8TBR4 150 aa22.29■■□□□ 1.16
PMS1-214ENST00000446877 SPPL2AQ8TCT8 520 aa22.29■■□□□ 1.16
PMS1-214ENST00000446877 CDKL2Q92772 493 aa22.29■■□□□ 1.16
PMS1-214ENST00000446877 WDYHV1Q96HA8 205 aa22.29■■□□□ 1.16
PMS1-214ENST00000446877 DACH2Q96NX9 599 aa22.29■■□□□ 1.16
PMS1-214ENST00000446877 RBM24Q9BX46 236 aaKnown RBP22.29■■□□□ 1.16
PMS1-214ENST00000446877 UGT2B28Q9BY64 529 aa22.29■■□□□ 1.16
PMS1-214ENST00000446877 UBQLN3Q9H347 655 aa22.29■■□□□ 1.16
PMS1-214ENST00000446877 LYARQ9NX58 379 aaKnown RBP22.29■■□□□ 1.16
PMS1-214ENST00000446877 TEX10Q9NXF1 929 aaPredicted RBP22.29■■□□□ 1.16
PMS1-214ENST00000446877 JKAMPQ9P055 326 aa22.29■■□□□ 1.16
PMS1-214ENST00000446877 OPTCQ9UBM4 332 aa22.29■■□□□ 1.16
PMS1-214ENST00000446877 NSD1Q96L73 2696 aaPredicted RBP22.29■■□□□ 1.16
PMS1-214ENST00000446877 GLOD5A6NK44 160 aa22.28■■□□□ 1.16
PMS1-214ENST00000446877 CASKO14936 926 aa22.28■■□□□ 1.16
PMS1-214ENST00000446877 HRGP04196 525 aa22.28■■□□□ 1.16
PMS1-214ENST00000446877 TMIGD3P0DMS9 266 aaPredicted RBP22.28■■□□□ 1.16
PMS1-214ENST00000446877 CD53P19397 219 aa22.28■■□□□ 1.16
PMS1-214ENST00000446877 GALNSP34059 522 aa22.28■■□□□ 1.16
PMS1-214ENST00000446877 PIK3CBP42338 1070 aa22.28■■□□□ 1.16
PMS1-214ENST00000446877 HNRNPH2P55795 449 aaKnown RBP22.28■■□□□ 1.16
PMS1-214ENST00000446877 SETDB1Q15047 1291 aa22.28■■□□□ 1.16
PMS1-214ENST00000446877 EIPR1Q53HC9 387 aa22.28■■□□□ 1.16
PMS1-214ENST00000446877 MYLK4Q86YV6 388 aaPredicted RBP22.28■■□□□ 1.16
PMS1-214ENST00000446877 ISL2Q96A47 359 aa22.28■■□□□ 1.16
PMS1-214ENST00000446877 JMJD1CQ15652 2540 aa22.28■■□□□ 1.16
PMS1-214ENST00000446877 WASHC1A8K0Z3 465 aa22.27■■□□□ 1.16
PMS1-214ENST00000446877 K7EPI3 171 aa22.27■■□□□ 1.16
PMS1-214ENST00000446877 PLPP1O14494 284 aa22.27■■□□□ 1.16
PMS1-214ENST00000446877 SEC31AO94979 1220 aaKnown RBP22.27■■□□□ 1.16
PMS1-214ENST00000446877 HEXAP06865 529 aa22.27■■□□□ 1.16
PMS1-214ENST00000446877 SLC35E2BP0CK96 405 aa22.27■■□□□ 1.16
PMS1-214ENST00000446877 SLC35E2P0CK97 266 aa22.27■■□□□ 1.16
PMS1-214ENST00000446877 NR2F6P10588 404 aa22.27■■□□□ 1.16
PMS1-214ENST00000446877 CYP4B1P13584 511 aa22.27■■□□□ 1.16
PMS1-214ENST00000446877 EPB42P16452 691 aa22.27■■□□□ 1.16
PMS1-214ENST00000446877 PTX3P26022 381 aaPredicted RBP22.27■■□□□ 1.16
PMS1-214ENST00000446877 CPA2P48052 419 aa22.27■■□□□ 1.16
PMS1-214ENST00000446877 ARFIP1P53367 373 aa22.27■■□□□ 1.16
PMS1-214ENST00000446877 GRHL2Q6ISB3 625 aa22.27■■□□□ 1.16
PMS1-214ENST00000446877 CYP20A1Q6UW02 462 aa22.27■■□□□ 1.16
PMS1-214ENST00000446877 ZBED8Q8IZ13 594 aa22.27■■□□□ 1.16
PMS1-214ENST00000446877 RNF175Q8N4F7 328 aa22.27■■□□□ 1.16
PMS1-214ENST00000446877 ZNF441Q8N8Z8 693 aa22.27■■□□□ 1.16
PMS1-214ENST00000446877 MTERF1Q99551 399 aaKnown RBP22.27■■□□□ 1.16
PMS1-214ENST00000446877 TRIM31Q9BZY9 425 aa22.27■■□□□ 1.16
PMS1-214ENST00000446877 ALG9Q9H6U8 611 aa22.27■■□□□ 1.16
PMS1-214ENST00000446877 SMYD2Q9NRG4 433 aa22.27■■□□□ 1.16
PMS1-214ENST00000446877 NUDT4Q9NZJ9 180 aa22.27■■□□□ 1.16
PMS1-214ENST00000446877 SUPT3HB4E1H0 165 aa22.26■■□□□ 1.15
PMS1-214ENST00000446877 CDH16O75309 829 aa22.26■■□□□ 1.15
PMS1-214ENST00000446877 SUPT3HO75486 399 aa22.26■■□□□ 1.15
PMS1-214ENST00000446877 CLPSP04118 112 aa22.26■■□□□ 1.15
PMS1-214ENST00000446877 KRT15P19012 456 aa22.26■■□□□ 1.15
PMS1-214ENST00000446877 SSTR4P31391 388 aa22.26■■□□□ 1.15
PMS1-214ENST00000446877 CASP3P42574 277 aa22.26■■□□□ 1.15
PMS1-214ENST00000446877 PHEXP78562 749 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms