RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 TMEM265A0A087WTH1 108 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 PRAMEF27A3QJZ7 478 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 C10orf142B7Z368 130 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 B3GALT2O43825 422 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 PDE9AO76083 593 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 MFN2O95140 757 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 GADD45GO95257 159 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 ITGAMP11215 1152 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 XKP51811 444 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 MAZP56270 477 aaKnown RBP8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 VSX2P58304 361 aaPredicted RBP8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 ID2Q02363 134 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 CDK5R2Q13319 367 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 PMS2P3Q13401 168 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 PUM1Q14671 1186 aaKnown RBP eCLIP8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 GPAT3Q53EU6 434 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 GPR153Q6NV75 609 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 Q6ZPB1 254 aaPredicted RBP8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 ABHD13Q7L211 337 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 PRSS41Q7RTY9 318 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 OOSP2Q86WS3 158 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 SHISA5Q8N114 240 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 SIX5Q8N196 739 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 ZNF687Q8N1G0 1237 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 NUP43Q8NFH3 380 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 BAHD1Q8TBE0 780 aaPredicted RBP8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 DOK4Q8TEW6 326 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 PHF10Q8WUB8 498 aaKnown RBP8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 RSC1A1Q92681 617 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 HDAC2Q92769 488 aaKnown RBP8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 UBE2FQ969M7 185 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 MPP4Q96JB8 637 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 SERINC2Q96SA4 455 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 CSF3RQ99062 836 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 PIP5K1AQ99755 562 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 CCDC3Q9BQI4 270 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 ORAI3Q9BRQ5 295 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 LRRC61Q9BV99 259 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 CCDC90BQ9GZT6 254 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 RBM38Q9H0Z9 239 aaKnown RBP8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 THSD1Q9NS62 852 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 RHBDL2Q9NX52 303 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 ZSCAN32Q9NX65 697 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 COLQQ9Y215 455 aaPredicted RBP8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 MRPS2Q9Y399 296 aaKnown RBP8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 ENPP4Q9Y6X5 453 aa8.98□□□□□ -0.97
COL6A4P1-201ENST00000446690 GOLGA4Q13439 2230 aaKnown RBP8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 A0A0J9YY10 115 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 TRIM64A6NGJ6 449 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 DPM1O60762 260 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 PFDN1O60925 122 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 ATP6V1G1O75348 118 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 SERPINB7O75635 380 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 WNT1P04628 370 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 FHP07954 510 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 CD38P28907 300 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 TLX1P31314 330 aaPredicted RBP8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 FMO3P31513 532 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 XCR1P46094 333 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 KHKP50053 298 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 LIM2P55344 173 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 RPP38P78345 283 aaKnown RBP8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 HPCAP84074 193 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 PRR5P85299 388 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 TNFRSF17Q02223 184 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 RPL6Q02878 288 aaKnown RBP8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 NPRL3Q12980 569 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 FZD5Q13467 585 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 MICAQ29983 383 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 DEFB110Q30KQ9 67 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 C6orf132Q5T0Z8 1188 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 C1QTNF12Q5T7M4 302 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 FAHD1Q6P587 224 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 DEF8Q6ZN54 512 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 RBM45Q8IUH3 476 aaKnown RBP8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 CLVS1Q8IUQ0 354 aaPredicted RBP8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 TAGAPQ8N103 731 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 LGI4Q8N135 537 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 SETD9Q8NE22 299 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 GPR32P1Q8NGA4 272 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 OR9Q2Q8NGE9 314 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 LMX1AQ8TE12 382 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 GTPBP3Q969Y2 492 aaKnown RBP8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 ELP4Q96EB1 424 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 ZNF681Q96N22 645 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 APOL4Q9BPW4 351 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 NIPSNAP1Q9BPW8 284 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 ROGDIQ9GZN7 287 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 IL21RQ9HBE5 538 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 C3orf14Q9HBI5 128 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 ACER3Q9NUN7 267 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 PTTG2Q9NZH5 202 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 RSL24D1Q9UHA3 163 aaKnown RBP8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 CLCA2Q9UQC9 943 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 KCNE3Q9Y6H6 103 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 hCG_2014768A0A024R1R8 64 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 OR5K3A6NET4 321 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 METTL12A8MUP2 240 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 EMC8O43402 210 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 XPNPEP2O43895 674 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms