RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 BICC1Q9H694 974 aaKnown RBP3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 TRPV5Q9NQA5 729 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 DDX18Q9NVP1 670 aaKnown RBP3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 ZNF319Q9P2F9 582 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 LHX3Q9UBR4 397 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 BAIAP2L1Q9UHR4 511 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 FBXL4Q9UKA2 621 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 DIMT1Q9UNQ2 313 aaKnown RBP3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 B9D1Q9UPM9 204 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 RIPK3Q9Y572 518 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 ABCC8Q09428 1581 aa3.9□□□□□ -1.78
HMGB1P48-201ENST00000446155 GSAPA4D1B5 854 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 MTMR11A4FU01 709 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 YJEFN3A6XGL0 299 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 SRRM4A7MD48 611 aaKnown RBP3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 A8MVM7 634 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 SDHDO14521 159 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 ATP6V0E1O15342 81 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 B4GALT2O60909 372 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 SDC3O75056 442 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 SNNO75324 88 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 UFL1O94874 794 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 NDUFA7O95182 113 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 EML2O95834 649 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 MT-ND1P03886 318 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 CSF2P04141 144 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 CA6P23280 308 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 TRIM23P36406 574 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 NPY2RP49146 381 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 DNA2P51530 1060 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 MYL7Q01449 175 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 MFGE8Q08431 387 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 NFATC2Q13469 925 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 MEF2DQ14814 521 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 P2RY6Q15077 328 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 TAF13Q15543 124 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 OR1C1Q15619 314 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 LRRC37A5PQ49AS3 106 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 TRIM65Q6PJ69 517 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 SLC24A5Q71RS6 500 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 RUFY3Q7L099 469 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 G2E3Q7L622 706 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 TRMT11Q7Z4G4 463 aaKnown RBP3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 LHFPL4Q7Z7J7 247 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 ISCA2Q86U28 154 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 CBWD2Q8IUF1 395 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 BHLHE23Q8NDY6 225 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 OR8J1Q8NGP2 316 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 AKR7LQ8NHP1 331 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 ZNF671Q8TAW3 534 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 TMEM37Q8WXS4 190 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 TMEM190Q8WZ59 177 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 SUSD6Q92537 303 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 CASP10Q92851 521 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 NDUFAF3Q9BU61 184 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 NFKBIZQ9BYH8 718 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 CRNKL1Q9BZJ0 848 aaKnown RBP3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 SHARPINQ9H0F6 387 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 CPVLQ9H3G5 476 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 FAM124BQ9H5Z6 455 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 TBC1D13Q9NVG8 400 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 C2orf42Q9NWW7 574 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 HYPKQ9NX55 129 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 TECRQ9NZ01 308 aaKnown RBP3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 EPHA6Q9UF33 1036 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 C19orf25Q9UFG5 118 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 MAN1B1Q9UKM7 699 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 GAB2Q9UQC2 676 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 TTC21BQ7Z4L5 1316 aa3.9□□□□□ -1.79
HMGB1P48-201ENST00000446155 TARBP1Q13395 1621 aaKnown RBP3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 IGHV4-61A0A0C4DH41 118 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 E9PBE3 544 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 E9PMD0 336 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 SGK494L7N484 410 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 PCDH7O60245 1069 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 CIB2O75838 187 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 PAK4O96013 591 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 IGHV4-59P01825 116 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 CD48P09326 243 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 PRSS56P0CW18 603 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 CYP11B1P15538 503 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 GPX3P22352 226 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 ATP5IP56385 69 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 HYAL1Q12794 435 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 CNTN1Q12860 1018 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 SELPLGQ14242 412 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 GRB14Q14449 540 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 SQLEQ14534 574 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 CLPPQ16740 277 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 DCAF4L1Q3SXM0 396 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 KIAA1644Q3SXP7 199 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 SLC25A53Q5H9E4 307 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 PLPP4Q5VZY2 271 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 TTC23Q5W5X9 447 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 TCEAL6Q6IPX3 200 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 CAPN13Q6MZZ7 669 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 BLOC1S2Q6QNY1 142 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 CWC27Q6UX04 472 aaKnown RBP3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 EFL1Q7Z2Z2 1120 aaKnown RBP3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 GOLGA7Q7Z5G4 137 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms