RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 IRS1P35568 1242 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 CSNK1DP48730 415 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 B4GALNT1Q00973 533 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 CCNJQ5T5M9 372 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 IDNKQ5T6J7 187 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 TNFAIP8L2Q6P589 184 aaPredicted RBP13.24□□□□□ -0.29
VPS52-212ENST00000445902 MMP21Q8N119 569 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 SLC9A6Q92581 669 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 ZNF582Q96NG8 517 aaPredicted RBP13.24□□□□□ -0.29
VPS52-212ENST00000445902 RBP7Q96R05 134 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 SMAD5Q99717 465 aaKnown RBP13.24□□□□□ -0.29
VPS52-212ENST00000445902 SLC12A9Q9BXP2 914 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 MVB12BQ9H7P6 319 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 FOLH1BQ9HBA9 442 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 TRPM5Q9NZQ8 1165 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 PPIEQ9UNP9 301 aaKnown RBP13.24□□□□□ -0.29
VPS52-212ENST00000445902 EEF1E1O43324 174 aaKnown RBP13.24□□□□□ -0.29
VPS52-212ENST00000445902 FCER2P06734 321 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 HOXD4P09016 255 aaPredicted RBP13.24□□□□□ -0.29
VPS52-212ENST00000445902 ANXA3P12429 323 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 CELP19835 753 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 SLC6A1P30531 599 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 SLC11A2P49281 568 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 RING1Q06587 406 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 ADAM15Q13444 863 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 GINS1Q14691 196 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 CTXN3Q4LDR2 81 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 BICRALQ6AI39 1079 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 BHLHB9Q6PI77 547 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 TRILQ7L0X0 811 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 FBXW5Q969U6 566 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 MED18Q9BUE0 208 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 RBCK1Q9BYM8 510 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 RC3H2Q9HBD1 1191 aaKnown RBP13.24□□□□□ -0.29
VPS52-212ENST00000445902 SPATA6Q9NWH7 488 aaPredicted RBP13.24□□□□□ -0.29
VPS52-212ENST00000445902 UBQLN2Q9UHD9 624 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 CLCA2Q9UQC9 943 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 SLC9A8Q9Y2E8 581 aa13.24□□□□□ -0.29
VPS52-212ENST00000445902 CLDN11O75508 207 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 BCHEP06276 602 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 ZNF8P17098 575 aaPredicted RBP13.23□□□□□ -0.29
VPS52-212ENST00000445902 ATP12AP54707 1039 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 RPS13P62277 151 aaKnown RBP13.23□□□□□ -0.29
VPS52-212ENST00000445902 EEF1A2Q05639 463 aaKnown RBP13.23□□□□□ -0.29
VPS52-212ENST00000445902 STK11Q15831 433 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 CRB2Q5IJ48 1285 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 PGBD2Q6P3X8 592 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 TRIM40Q6P9F5 258 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 CFAP77Q6ZQR2 320 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 TECPR1Q7Z6L1 1165 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 ZNF467Q7Z7K2 595 aaPredicted RBP13.23□□□□□ -0.29
VPS52-212ENST00000445902 LUZP2Q86TE4 346 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 WBP2Q969T9 261 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 RNFT2Q96EX2 444 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 FUBP3Q96I24 572 aaKnown RBP eCLIP13.23□□□□□ -0.29
VPS52-212ENST00000445902 METTL2AQ96IZ6 378 aaKnown RBP13.23□□□□□ -0.29
VPS52-212ENST00000445902 LINC00052Q96N35 136 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 RNF32Q9H0A6 362 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 SAP130Q9H0E3 1048 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 RANBP3Q9H6Z4 567 aaPredicted RBP13.23□□□□□ -0.29
VPS52-212ENST00000445902 RNF181Q9P0P0 153 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 CLEC4AQ9UMR7 237 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 ANGPT4Q9Y264 503 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 VWA8A3KMH1 1905 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 SGK494L7N484 410 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 SMAD6O43541 496 aaKnown RBP13.23□□□□□ -0.29
VPS52-212ENST00000445902 SOD1P00441 154 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 PIN1Q13526 163 aaPredicted RBP13.23□□□□□ -0.29
VPS52-212ENST00000445902 PRSS53Q2L4Q9 553 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 MPEG1Q2M385 716 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 RAET1GQ6H3X3 334 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 CXorf57Q6NSI4 855 aaKnown RBP13.23□□□□□ -0.29
VPS52-212ENST00000445902 TMEM107Q6UX40 140 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 KIAA0907Q7Z7F0 614 aaPredicted RBP13.23□□□□□ -0.29
VPS52-212ENST00000445902 ASB11Q8WXH4 323 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 MRPS31Q92665 395 aaKnown RBP13.23□□□□□ -0.29
VPS52-212ENST00000445902 RAB8BQ92930 207 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 RBPMSQ93062 196 aaKnown RBP13.23□□□□□ -0.29
VPS52-212ENST00000445902 SORCS2Q96PQ0 1159 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 LIN7BQ9HAP6 207 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 SEMA3GQ9NS98 782 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 CD84Q9UIB8 345 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 DOCK6Q96HP0 2047 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 PRR23AA6NEV1 266 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 RNASET2O00584 256 aaKnown RBP13.23□□□□□ -0.29
VPS52-212ENST00000445902 DHFRP00374 187 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 IFNA7P01567 189 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 IFNA14P01570 189 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 CORO1AP31146 461 aaKnown RBP13.23□□□□□ -0.29
VPS52-212ENST00000445902 ASMTP46597 345 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 RAB14P61106 215 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 NAE1Q13564 534 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 NTRK2Q16620 822 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 CCSMST1Q4G0I0 132 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 PLA1AQ53H76 456 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 THOC6Q86W42 341 aaKnown RBP13.23□□□□□ -0.29
VPS52-212ENST00000445902 OR4D11Q8NGI4 311 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 SLC7A13Q8TCU3 470 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 SIPA1Q96FS4 1042 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 THAP7Q9BT49 309 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms