RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 IGHEP01854 428 aa16.09■□□□□ 0.17
LIME1-202ENST00000444951 PORP16435 677 aaPredicted RBP16.09■□□□□ 0.17
LIME1-202ENST00000444951 DDX5P17844 614 aaKnown RBP16.09■□□□□ 0.17
LIME1-202ENST00000444951 NT5EP21589 574 aa16.09■□□□□ 0.17
LIME1-202ENST00000444951 KIR3DL1P43629 444 aa16.09■□□□□ 0.17
LIME1-202ENST00000444951 NCBP2P52298 156 aaKnown RBP eCLIP16.09■□□□□ 0.172e-18■■□□□ 12.4
LIME1-202ENST00000444951 PLIN5Q00G26 463 aa16.09■□□□□ 0.17
LIME1-202ENST00000444951 SERTAD2Q14140 314 aa16.09■□□□□ 0.17
LIME1-202ENST00000444951 SSPNQ14714 243 aa16.09■□□□□ 0.17
LIME1-202ENST00000444951 TIGD2Q4W5G0 525 aa16.09■□□□□ 0.17
LIME1-202ENST00000444951 SFT2D3Q587I9 215 aa16.09■□□□□ 0.17
LIME1-202ENST00000444951 MED25Q71SY5 747 aa16.09■□□□□ 0.17
LIME1-202ENST00000444951 LRRC25Q8N386 305 aaPredicted RBP16.09■□□□□ 0.17
LIME1-202ENST00000444951 CPSF7Q8N684 471 aaKnown RBP16.09■□□□□ 0.17
LIME1-202ENST00000444951 ADCY4Q8NFM4 1077 aa16.09■□□□□ 0.17
LIME1-202ENST00000444951 VPS33AQ96AX1 596 aa16.09■□□□□ 0.17
LIME1-202ENST00000444951 RBM18Q96H35 190 aaKnown RBP16.09■□□□□ 0.17
LIME1-202ENST00000444951 CLDN16Q9Y5I7 305 aa16.09■□□□□ 0.17
LIME1-202ENST00000444951 KCNMB2Q9Y691 235 aa16.09■□□□□ 0.17
LIME1-202ENST00000444951 LRRK2Q5S007 2527 aa16.08■□□□□ 0.17
LIME1-202ENST00000444951 TCRBV16S1A1N1A0A5B0 115 aa16.08■□□□□ 0.16
LIME1-202ENST00000444951 FAM234BA2RU67 622 aa16.08■□□□□ 0.16
LIME1-202ENST00000444951 CFLARO15519 480 aa16.08■□□□□ 0.16
LIME1-202ENST00000444951 SEC24DO94855 1032 aaPredicted RBP16.08■□□□□ 0.16
LIME1-202ENST00000444951 MMP11P24347 488 aa16.08■□□□□ 0.16
LIME1-202ENST00000444951 PGDP52209 483 aa16.08■□□□□ 0.16
LIME1-202ENST00000444951 MANFP55145 182 aaKnown RBP16.08■□□□□ 0.16
LIME1-202ENST00000444951 KCNK10P57789 538 aa16.08■□□□□ 0.16
LIME1-202ENST00000444951 C21orf58P58505 322 aa16.08■□□□□ 0.16
LIME1-202ENST00000444951 SRSF11Q05519 484 aaKnown RBP16.08■□□□□ 0.16
LIME1-202ENST00000444951 HSPB3Q12988 150 aa16.08■□□□□ 0.16
LIME1-202ENST00000444951 KLF10Q13118 480 aa16.08■□□□□ 0.16
LIME1-202ENST00000444951 LTB4RQ15722 352 aa16.08■□□□□ 0.16
LIME1-202ENST00000444951 MPEG1Q2M385 716 aa16.08■□□□□ 0.16
LIME1-202ENST00000444951 DGAT2L6Q6ZPD8 337 aa16.08■□□□□ 0.16
LIME1-202ENST00000444951 ZNF551Q7Z340 670 aaPredicted RBP16.08■□□□□ 0.16
LIME1-202ENST00000444951 CPEB2Q7Z5Q1 589 aaKnown RBP16.08■□□□□ 0.16
LIME1-202ENST00000444951 PPP1R32Q7Z5V6 425 aa16.08■□□□□ 0.16
LIME1-202ENST00000444951 ANKRD46Q86W74 232 aa16.08■□□□□ 0.16
LIME1-202ENST00000444951 RAB43Q86YS6 212 aa16.08■□□□□ 0.16
LIME1-202ENST00000444951 FUNDC1Q8IVP5 155 aa16.08■□□□□ 0.16
LIME1-202ENST00000444951 GLB1L3Q8NCI6 653 aaPredicted RBP16.08■□□□□ 0.16
LIME1-202ENST00000444951 TESCQ96BS2 214 aa16.08■□□□□ 0.16
LIME1-202ENST00000444951 COQ8BQ96D53 544 aa16.08■□□□□ 0.16
LIME1-202ENST00000444951 ZNF681Q96N22 645 aa16.08■□□□□ 0.16
LIME1-202ENST00000444951 OR52E6Q96RD3 313 aa16.08■□□□□ 0.16
LIME1-202ENST00000444951 BHLHE41Q9C0J9 482 aaPredicted RBP16.08■□□□□ 0.16
LIME1-202ENST00000444951 SLAMF7Q9NQ25 335 aa16.08■□□□□ 0.16
LIME1-202ENST00000444951 TAS2R7Q9NYW3 318 aa16.08■□□□□ 0.16
LIME1-202ENST00000444951 C19orf25Q9UFG5 118 aaPredicted RBP16.08■□□□□ 0.16
LIME1-202ENST00000444951 TP53TG5Q9Y2B4 290 aa16.08■□□□□ 0.16
LIME1-202ENST00000444951 HS3ST3B1Q9Y662 390 aa16.08■□□□□ 0.16
LIME1-202ENST00000444951 CAPN7Q9Y6W3 813 aa16.08■□□□□ 0.16
LIME1-202ENST00000444951 A0A1W2PRB8 838 aa16.07■□□□□ 0.16
LIME1-202ENST00000444951 MYO1GB0I1T2 1018 aa16.07■□□□□ 0.16
LIME1-202ENST00000444951 SOCS6O14544 535 aa16.07■□□□□ 0.16
LIME1-202ENST00000444951 TBX19O60806 448 aa16.07■□□□□ 0.16
LIME1-202ENST00000444951 DCTN3O75935 186 aa16.07■□□□□ 0.16
LIME1-202ENST00000444951 CPSF4O95639 269 aaKnown RBP16.07■□□□□ 0.16
LIME1-202ENST00000444951 ABCB1P08183 1280 aaPredicted RBP16.07■□□□□ 0.16
LIME1-202ENST00000444951 SLC35E2P0CK97 266 aa16.07■□□□□ 0.16
LIME1-202ENST00000444951 PCSK2P16519 638 aa16.07■□□□□ 0.16
LIME1-202ENST00000444951 MPIP34949 423 aa16.07■□□□□ 0.16
LIME1-202ENST00000444951 GPC1P35052 558 aa16.07■□□□□ 0.16
LIME1-202ENST00000444951 CASRP41180 1078 aa16.07■□□□□ 0.16
LIME1-202ENST00000444951 STT3AP46977 705 aa16.07■□□□□ 0.16
LIME1-202ENST00000444951 ZFP36L2P47974 494 aaKnown RBP16.07■□□□□ 0.16
LIME1-202ENST00000444951 MRPL19P49406 292 aaKnown RBP16.07■□□□□ 0.16
LIME1-202ENST00000444951 PHC1P78364 1004 aa16.07■□□□□ 0.16
LIME1-202ENST00000444951 IRX1P78414 480 aaPredicted RBP16.07■□□□□ 0.16
LIME1-202ENST00000444951 IGLV3-21P80748 117 aaPredicted RBP16.07■□□□□ 0.16
LIME1-202ENST00000444951 FOXK1P85037 733 aa16.07■□□□□ 0.16
LIME1-202ENST00000444951 VPS26BQ4G0F5 336 aa16.07■□□□□ 0.16
LIME1-202ENST00000444951 CRTC2Q53ET0 693 aaPredicted RBP16.07■□□□□ 0.16
LIME1-202ENST00000444951 C6orf163Q5TEZ5 329 aa16.07■□□□□ 0.16
LIME1-202ENST00000444951 TMEM205Q6UW68 189 aa16.07■□□□□ 0.16
LIME1-202ENST00000444951 SAMD14Q8IZD0 417 aaPredicted RBP16.07■□□□□ 0.16
LIME1-202ENST00000444951 ST13P4Q8IZP2 240 aaPredicted RBP16.07■□□□□ 0.16
LIME1-202ENST00000444951 CLECL1Q8IZS7 167 aa16.07■□□□□ 0.16
LIME1-202ENST00000444951 AMER2Q8N7J2 671 aa16.07■□□□□ 0.16
LIME1-202ENST00000444951 ANKS4BQ8N8V4 417 aa16.07■□□□□ 0.16
LIME1-202ENST00000444951 OR9A2Q8NGT5 310 aa16.07■□□□□ 0.16
LIME1-202ENST00000444951 KAT2AQ92830 837 aa16.07■□□□□ 0.16
LIME1-202ENST00000444951 RIT1Q92963 219 aa16.07■□□□□ 0.16
LIME1-202ENST00000444951 MAGED4Q96JG8 741 aa16.07■□□□□ 0.16
LIME1-202ENST00000444951 GLIPR2Q9H4G4 154 aa16.07■□□□□ 0.16
LIME1-202ENST00000444951 TNRC6AQ8NDV7 1962 aaKnown RBP16.06■□□□□ 0.16
LIME1-202ENST00000444951 CCDC154A6NI56 674 aa16.06■□□□□ 0.16
LIME1-202ENST00000444951 C17orf105B2RV13 164 aa16.06■□□□□ 0.16
LIME1-202ENST00000444951 MASP2O00187 686 aa16.06■□□□□ 0.16
LIME1-202ENST00000444951 PEX12O00623 359 aa16.06■□□□□ 0.16
LIME1-202ENST00000444951 C6orf47O95873 294 aa16.06■□□□□ 0.16
LIME1-202ENST00000444951 IL6P05231 212 aa16.06■□□□□ 0.16
LIME1-202ENST00000444951 PGRP06401 933 aa16.06■□□□□ 0.16
LIME1-202ENST00000444951 ATP1A4Q13733 1029 aa16.06■□□□□ 0.16
LIME1-202ENST00000444951 ZNF267Q14586 743 aaPredicted RBP16.06■□□□□ 0.16
LIME1-202ENST00000444951 DPY19L1Q2PZI1 675 aa16.06■□□□□ 0.16
LIME1-202ENST00000444951 LACTB2Q53H82 288 aaPredicted RBP16.06■□□□□ 0.16
LIME1-202ENST00000444951 PAPD4Q6PIY7 484 aaKnown RBP16.06■□□□□ 0.16
LIME1-202ENST00000444951 BLOC1S3Q6QNY0 202 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms