RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 FRG2BQ96QU4 278 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 TREX2Q9BQ50 279 aaPredicted RBP10.85□□□□□ -0.67
TTC28-203ENST00000442232 TTYH2Q9BSA4 534 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 UCK2Q9BZX2 261 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 ELOVL6Q9H5J4 265 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 ZNF703Q9H7S9 590 aaPredicted RBP10.85□□□□□ -0.67
TTC28-203ENST00000442232 NINJ2Q9NZG7 142 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 ASB4Q9Y574 426 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 HRH3Q9Y5N1 445 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 NCKAP5O14513 1909 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 C15orf38-AP3S2A0A0A6YYH1 394 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 A0A1W2PR48 441 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 TOXO94900 526 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 ZWINTO95229 277 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 ACSL3O95573 720 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 GBAP04062 536 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 CELA3AP09093 270 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 GLI4P10075 376 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 IGFBP2P18065 325 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 DEKP35659 375 aaKnown RBP10.84□□□□□ -0.67
TTC28-203ENST00000442232 MASP1P48740 699 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 NR0B1P51843 470 aaKnown RBP10.84□□□□□ -0.67
TTC28-203ENST00000442232 NEK2P51955 445 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 RPS6KA2Q15349 733 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 NTRK2Q16620 822 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 SLC25A35Q3KQZ1 300 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 CCNYL2Q5T2Q4 361 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 DGAT2L6Q6ZPD8 337 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 WDR53Q7Z5U6 358 aaPredicted RBP10.84□□□□□ -0.67
TTC28-203ENST00000442232 ACBD4Q8NC06 268 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 OR4K14Q8NGD5 310 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 CDK15Q96Q40 435 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 LRRC1Q9BTT6 524 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 ZNF717Q9BY31 904 aaPredicted RBP10.84□□□□□ -0.67
TTC28-203ENST00000442232 SEMA4BQ9NPR2 832 aaPredicted RBP10.84□□□□□ -0.67
TTC28-203ENST00000442232 NPDC1Q9NQX5 325 aaPredicted RBP10.84□□□□□ -0.67
TTC28-203ENST00000442232 ZDHHC18Q9NUE0 388 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 NMRK1Q9NWW6 199 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 XPR1Q9UBH6 696 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 TNFRSF10DQ9UBN6 386 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 KCNN3Q9UGI6 736 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 ADAM29Q9UKF5 820 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 CHCHD2Q9Y6H1 151 aaPredicted RBP10.84□□□□□ -0.67
TTC28-203ENST00000442232 EXPH5Q8NEV8 1989 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 F8P00451 2351 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 FREM3P0C091 2139 aa10.84□□□□□ -0.67
TTC28-203ENST00000442232 AKAP9Q99996 3911 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 ADGRG4Q8IZF6 3080 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 HMX2A2RU54 273 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 GOLGA6L10A6NI86 522 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 HSPB2A8KAH6 182 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 STX16-NPEPL1H3BU86 382 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 STX16O14662 325 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 URI1O94763 535 aaPredicted RBP10.83□□□□□ -0.68
TTC28-203ENST00000442232 LRATO95237 230 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 COL6A2P12110 1019 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 NT5EP21589 574 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 CNTFP26441 200 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 SSTR4P31391 388 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 GCKP35557 465 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 TRPC1P48995 793 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 MAPK12P53778 367 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 TFF3Q07654 80 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 TOMM20Q15388 145 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 SF3B4Q15427 424 aaKnown RBP eCLIP10.83□□□□□ -0.68
TTC28-203ENST00000442232 HSPB2Q16082 182 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 WHAMMP3Q1A5X7 153 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 RIPPLY2Q5TAB7 128 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 MILR1Q7Z6M3 343 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 PACS2Q86VP3 889 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 DMRTC2Q8IXT2 367 aaPredicted RBP10.83□□□□□ -0.68
TTC28-203ENST00000442232 LRRC25Q8N386 305 aaPredicted RBP10.83□□□□□ -0.68
TTC28-203ENST00000442232 MNS1Q8NEH6 495 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 OR52B6Q8NGF0 335 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 NEIL3Q8TAT5 605 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 SLC44A1Q8WWI5 657 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 TP53INP1Q96A56 240 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 GPR78Q96P69 363 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 PAFAH2Q99487 392 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 FMO2Q99518 471 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 NTMT1Q9BV86 223 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 MRPL1Q9BYD6 325 aaKnown RBP10.83□□□□□ -0.68
TTC28-203ENST00000442232 SLC6A15Q9H2J7 730 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 CDC42EP4Q9H3Q1 356 aaKnown RBP10.83□□□□□ -0.68
TTC28-203ENST00000442232 CXorf21Q9HAI6 301 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 SH2D2AQ9NP31 389 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 ACKR4Q9NPB9 350 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 TEX10Q9NXF1 929 aaPredicted RBP10.83□□□□□ -0.68
TTC28-203ENST00000442232 PCTPQ9UKL6 214 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 SLC12A4Q9UP95 1085 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 CFL2Q9Y281 166 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 FAM215AQ9Y5M1 114 aa10.83□□□□□ -0.68
TTC28-203ENST00000442232 A0A0G2JNJ9 132 aa10.82□□□□□ -0.68
TTC28-203ENST00000442232 ANKRD33BA6NCL7 494 aa10.82□□□□□ -0.68
TTC28-203ENST00000442232 LRRC3CA6NJW4 275 aa10.82□□□□□ -0.68
TTC28-203ENST00000442232 POC1B-GALNT4F8VUJ3 575 aa10.82□□□□□ -0.68
TTC28-203ENST00000442232 OR7A17O14581 309 aa10.82□□□□□ -0.68
TTC28-203ENST00000442232 PGRMC2O15173 223 aa10.82□□□□□ -0.68
TTC28-203ENST00000442232 CDH16O75309 829 aa10.82□□□□□ -0.68
TTC28-203ENST00000442232 TRAPPC6AO75865 159 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms