RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 CNN1P51911 297 aaKnown RBP3.83□□□□□ -1.8
PFDN4-202ENST00000441080 CCZ1BP86790 482 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 CCZ1P86791 482 aaPredicted RBP3.83□□□□□ -1.8
PFDN4-202ENST00000441080 AP1B1Q10567 949 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 KLF5Q13887 457 aaPredicted RBP3.83□□□□□ -1.8
PFDN4-202ENST00000441080 ZNF239Q16600 458 aaKnown RBP3.83□□□□□ -1.8
PFDN4-202ENST00000441080 C15orf32Q32M92 178 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 NHLRC3Q5JS37 347 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 SEL1L3Q68CR1 1132 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 ETFRF1Q6IPR1 90 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 RFWD3Q6PCD5 774 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 ASRGL1Q7L266 308 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 CEACAM19Q7Z692 300 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 LINC00518Q8N0U6 118 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 SUMF1Q8NBK3 374 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 RBM18Q96H35 190 aaKnown RBP3.83□□□□□ -1.8
PFDN4-202ENST00000441080 CAPNS2Q96L46 248 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 C1orf147Q96MC9 270 aaPredicted RBP3.83□□□□□ -1.8
PFDN4-202ENST00000441080 TEX13AQ9BXU3 409 aaPredicted RBP3.83□□□□□ -1.8
PFDN4-202ENST00000441080 Q9HAA7 133 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 IL1RL2Q9HB29 575 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 NDUFA13Q9P0J0 144 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 SEC14L4Q9UDX3 406 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 AFF2P51816 1311 aa3.82□□□□□ -1.8
PFDN4-202ENST00000441080 TRBV2A0A0J9YWF9 115 aa3.82□□□□□ -1.8
PFDN4-202ENST00000441080 MACROD2A1Z1Q3 448 aa3.82□□□□□ -1.8
PFDN4-202ENST00000441080 SH2D1BO14796 132 aa3.82□□□□□ -1.8
PFDN4-202ENST00000441080 MCF2LO15068 1137 aa3.82□□□□□ -1.8
PFDN4-202ENST00000441080 BCL2L11O43521 198 aa3.82□□□□□ -1.8
PFDN4-202ENST00000441080 CXCL14O95715 111 aa3.82□□□□□ -1.8
PFDN4-202ENST00000441080 HSD17B1P14061 328 aa3.82□□□□□ -1.8
PFDN4-202ENST00000441080 MARCKSP29966 332 aaPredicted RBP3.82□□□□□ -1.8
PFDN4-202ENST00000441080 NDST1P52848 882 aa3.82□□□□□ -1.8
PFDN4-202ENST00000441080 RPS4XP62701 263 aaKnown RBP3.82□□□□□ -1.8
PFDN4-202ENST00000441080 HAGHQ16775 308 aa3.82□□□□□ -1.8
PFDN4-202ENST00000441080 ANKRD55Q3KP44 614 aa3.82□□□□□ -1.8
PFDN4-202ENST00000441080 HIST2H2AA3Q6FI13 130 aa3.82□□□□□ -1.8
PFDN4-202ENST00000441080 RHBDD2Q6NTF9 364 aa3.82□□□□□ -1.8
PFDN4-202ENST00000441080 ABRAXAS1Q6UWZ7 409 aa3.82□□□□□ -1.8
PFDN4-202ENST00000441080 GPR142Q7Z601 462 aa3.82□□□□□ -1.8
PFDN4-202ENST00000441080 FLVCR1-AS1Q8TAF5 88 aa3.82□□□□□ -1.8
PFDN4-202ENST00000441080 MGARPQ8TDB4 240 aa3.82□□□□□ -1.8
PFDN4-202ENST00000441080 SPATA13Q96N96 652 aa3.82□□□□□ -1.8
PFDN4-202ENST00000441080 DDX47Q9H0S4 455 aaKnown RBP3.82□□□□□ -1.8
PFDN4-202ENST00000441080 CARD9Q9H257 536 aa3.82□□□□□ -1.8
PFDN4-202ENST00000441080 ZNF581Q9P0T4 197 aa3.82□□□□□ -1.8
PFDN4-202ENST00000441080 COPS7AQ9UBW8 275 aa3.82□□□□□ -1.8
PFDN4-202ENST00000441080 SLC6A5Q9Y345 797 aa3.82□□□□□ -1.8
PFDN4-202ENST00000441080 ATG4BQ9Y4P1 393 aa3.82□□□□□ -1.8
PFDN4-202ENST00000441080 SYCE3A1L190 88 aa3.81□□□□□ -1.8
PFDN4-202ENST00000441080 HIST1H2AGP0C0S8 130 aaPredicted RBP3.81□□□□□ -1.8
PFDN4-202ENST00000441080 FAM200BP0CF97 657 aa3.81□□□□□ -1.8
PFDN4-202ENST00000441080 GP9P14770 177 aa3.81□□□□□ -1.8
PFDN4-202ENST00000441080 HNRNPFP52597 415 aaKnown RBP3.81□□□□□ -1.8
PFDN4-202ENST00000441080 CNPY1Q3B7I2 92 aa3.81□□□□□ -1.8
PFDN4-202ENST00000441080 SLC25A30Q5SVS4 291 aa3.81□□□□□ -1.8
PFDN4-202ENST00000441080 DLEU7Q6UYE1 221 aa3.81□□□□□ -1.8
PFDN4-202ENST00000441080 SLC22A16Q86VW1 577 aa3.81□□□□□ -1.8
PFDN4-202ENST00000441080 HPS6Q86YV9 775 aa3.81□□□□□ -1.8
PFDN4-202ENST00000441080 HIPK1Q86Z02 1210 aa3.81□□□□□ -1.8
PFDN4-202ENST00000441080 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.81□□□□□ -1.8
PFDN4-202ENST00000441080 ZNF491Q8N8L2 437 aa3.81□□□□□ -1.8
PFDN4-202ENST00000441080 HIST1H2ACQ93077 130 aa3.81□□□□□ -1.8
PFDN4-202ENST00000441080 DCTPP1Q9H773 170 aa3.81□□□□□ -1.8
PFDN4-202ENST00000441080 ABCC13Q9NSE7 274 aa3.81□□□□□ -1.8
PFDN4-202ENST00000441080 FAM153AQ9UHL3 310 aa3.81□□□□□ -1.8
PFDN4-202ENST00000441080 A0A087WWV3 80 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 ZNF840PA6NDX5 716 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 ZNF487B1APH4 448 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 K7ERI5 159 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 LRRTM2O43300 516 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 NME2P1O60361 137 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 ZNF354AO60765 605 aaPredicted RBP3.8□□□□□ -1.8
PFDN4-202ENST00000441080 LRP3O75074 770 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 VENTXO95231 258 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 SYNGR4O95473 234 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 APRTP07741 180 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 BRCC3P46736 316 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 SLC7A2P52569 658 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 ZNF131P52739 623 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 NLRP11P59045 1033 aaKnown RBP3.8□□□□□ -1.8
PFDN4-202ENST00000441080 SRP54P61011 504 aaKnown RBP3.8□□□□□ -1.8
PFDN4-202ENST00000441080 TRA2BP62995 288 aaKnown RBP3.8□□□□□ -1.8
PFDN4-202ENST00000441080 CRMP1Q14194 572 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 HKDC1Q2TB90 917 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 TCHHL1Q5QJ38 904 aaPredicted RBP3.8□□□□□ -1.8
PFDN4-202ENST00000441080 MOB2Q70IA6 237 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 LEMD2Q8NC56 503 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 TMEM185AQ8NFB2 350 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 OR6T1Q8NGN1 323 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 EXOC6Q8TAG9 804 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 AGAP11Q8TF27 550 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 NTNG2Q96CW9 530 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 ST6GALNAC5Q9BVH7 336 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 THAP9Q9H5L6 903 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 ZNF446Q9NWS9 450 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 CLEC5AQ9NY25 188 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 TRIM10Q9UDY6 481 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 TUBGCP4Q9UGJ1 667 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 CIDEBQ9UHD4 219 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms