RNA–Protein interactions for RNA: ENST00000440289.6

PTPRJ-202, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 1 (best) BASIC

Gene PTPRJ, Length 3,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-202ENST00000440289 CCDC58Q4VC31 144 aa17.32■□□□□ 0.36
PTPRJ-202ENST00000440289 Q5BKY6 102 aa17.32■□□□□ 0.36
PTPRJ-202ENST00000440289 SLC30A6Q6NXT4 461 aa17.32■□□□□ 0.36
PTPRJ-202ENST00000440289 TTC23LQ6PF05 361 aa17.32■□□□□ 0.36
PTPRJ-202ENST00000440289 Q6ZNB5 142 aa17.32■□□□□ 0.36
PTPRJ-202ENST00000440289 SLC22A4Q9H015 551 aa17.32■□□□□ 0.36
PTPRJ-202ENST00000440289 KLHL1Q9NR64 748 aa17.32■□□□□ 0.36
PTPRJ-202ENST00000440289 SRRDQ9UH36 339 aa17.32■□□□□ 0.36
PTPRJ-202ENST00000440289 NDRG2Q9UN36 371 aaKnown RBP17.32■□□□□ 0.36
PTPRJ-202ENST00000440289 RPL36Q9Y3U8 105 aaKnown RBP17.32■□□□□ 0.36
PTPRJ-202ENST00000440289 HSPB11Q9Y547 144 aa17.32■□□□□ 0.36
PTPRJ-202ENST00000440289 A0A1W2PPK0 400 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 AGAP14A8MT82 685 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 SLCO2B1O94956 709 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 CSF3P09919 207 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 TIMP2P16035 220 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 PRPH2P23942 346 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 CRYBB2P43320 205 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 PSPHP78330 225 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 DDI2Q5TDH0 399 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 PPP2R2DQ66LE6 453 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 LINC00299Q6ZSB3 139 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 KRT74Q7RTS7 529 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 COMTD1Q86VU5 262 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 TBC1D20Q96BZ9 403 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 SLC6A18Q96N87 628 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 PLA2G12AQ9BZM1 189 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 PDPK1O15530 556 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 ARHGEF15O94989 841 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 ARAFP10398 606 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 IL12RB1P42701 662 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 CCT3P49368 545 aaKnown RBP17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 SRP54P61011 504 aaKnown RBP17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 CSTF1Q05048 431 aaKnown RBP17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 FCHO2Q0JRZ9 810 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 GPR50Q13585 617 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 TEAD2Q15562 447 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 Q8N402 240 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 SMAP2Q8WU79 429 aaPredicted RBP17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 ZFPM2Q8WW38 1151 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 HMX1Q9NP08 348 aaPredicted RBP17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 FBXW2Q9UKT8 454 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 LAMA1P25391 3075 aa17.31■□□□□ 0.36
PTPRJ-202ENST00000440289 A0A1W2PS29 197 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 DEFB103AP81534 67 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 PRAMEF14Q5SWL7 426 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 SLC35F1Q5T1Q4 408 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 PRAMEF13Q5VWM6 474 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 YIPF7Q8N8F6 280 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 FLCNQ8NFG4 579 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 GPA33Q99795 319 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 RSPO3Q9BXY4 272 aaPredicted RBP17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 SEC14L4Q9UDX3 406 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 PCM1Q15154 2024 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 ACRP10323 421 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 TATDN3Q17R31 274 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 UNC5DQ6UXZ4 953 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 RNFT2Q96EX2 444 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 DCLRE1CQ96SD1 692 aaKnown RBP17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 TREX2Q9BQ50 279 aaPredicted RBP17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 SRRQ9GZT4 340 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 OR51I1Q9H343 314 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 ATG2BQ96BY7 2078 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 TRAV6A0A075B6T7 132 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 CAPN5O15484 640 aaPredicted RBP17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 WASP42768 502 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 KIR2DL3P43628 341 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 CTBP2P56545 445 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 LHX8Q68G74 356 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 METTL2BQ6P1Q9 378 aaKnown RBP17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 PGBD2Q6P3X8 592 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 CNIH2Q6PI25 160 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 CCDC116Q8IYX3 515 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 SLC43A3Q8NBI5 491 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 FAM46AQ96IP4 442 aaKnown RBP17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 KCTD7Q96MP8 289 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 BBS4Q96RK4 519 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 CDCA4Q9BXL8 241 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 BACE2Q9Y5Z0 518 aa17.3■□□□□ 0.36
PTPRJ-202ENST00000440289 IGLV3-16A0A075B6K0 115 aa17.29■□□□□ 0.36
PTPRJ-202ENST00000440289 ZC3H12DA2A288 527 aaKnown RBP17.29■□□□□ 0.36
PTPRJ-202ENST00000440289 MMP11P24347 488 aa17.29■□□□□ 0.36
PTPRJ-202ENST00000440289 GPR4P46093 362 aa17.29■□□□□ 0.36
PTPRJ-202ENST00000440289 CDK10Q15131 360 aa17.29■□□□□ 0.36
PTPRJ-202ENST00000440289 BTBD16Q32M84 506 aa17.29■□□□□ 0.36
PTPRJ-202ENST00000440289 NXPE4Q6UWF7 544 aa17.29■□□□□ 0.36
PTPRJ-202ENST00000440289 MARCH9Q86YJ5 346 aa17.29■□□□□ 0.36
PTPRJ-202ENST00000440289 PGBD3Q8N328 593 aa17.29■□□□□ 0.36
PTPRJ-202ENST00000440289 OR52I1Q8NGK6 324 aa17.29■□□□□ 0.36
PTPRJ-202ENST00000440289 OR6T1Q8NGN1 323 aa17.29■□□□□ 0.36
PTPRJ-202ENST00000440289 POP5Q969H6 163 aaKnown RBP17.29■□□□□ 0.36
PTPRJ-202ENST00000440289 TRIM45Q9H8W5 580 aaPredicted RBP17.29■□□□□ 0.36
PTPRJ-202ENST00000440289 BRF2Q9HAW0 419 aa17.29■□□□□ 0.36
PTPRJ-202ENST00000440289 ASAH2Q9NR71 780 aa17.29■□□□□ 0.36
PTPRJ-202ENST00000440289 PCYT1BQ9Y5K3 369 aaPredicted RBP17.29■□□□□ 0.36
PTPRJ-202ENST00000440289 PLPP1O14494 284 aa17.29■□□□□ 0.36
PTPRJ-202ENST00000440289 CST5P28325 142 aaPredicted RBP17.29■□□□□ 0.36
PTPRJ-202ENST00000440289 SSR2P43308 183 aa17.29■□□□□ 0.36
PTPRJ-202ENST00000440289 TAS2R41P59536 307 aa17.29■□□□□ 0.36
PTPRJ-202ENST00000440289 MESP2Q0VG99 397 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms