RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 SSMEM1Q8WWF3 244 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 ATP6V0A1Q93050 837 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 ZNF597Q96LX8 424 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 LPAR4Q99677 370 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 CHCHD5Q9BSY4 110 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 IDI2Q9BXS1 227 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 BEX2Q9BXY8 128 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 PARLQ9H300 379 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 GTSE1Q9NYZ3 720 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 GDE1Q9NZC3 331 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 THAP10Q9P2Z0 257 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 B4GALT7Q9UBV7 327 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 AASSQ9UDR5 926 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 SEC63Q9UGP8 760 aaKnown RBP2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 YLPM1P49750 1951 aaKnown RBP2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 OBSL1O75147 1896 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 IGHV4-30-2A0A087WSY4 118 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 ZNF840PA6NDX5 716 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 SNURFLB1AK76 121 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 B4E171 279 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 F5H0A9 414 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 TEX28O15482 410 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 SNAP91O60641 907 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 SMIM18P0DKX4 95 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 PTPN3P26045 913 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 MAN1A1P33908 653 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 SOX3P41225 446 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 GARSP41250 739 aaKnown RBP2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 TSPAN7P41732 249 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 MAT1AQ00266 395 aaKnown RBP2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 POU5F1Q01860 360 aaKnown RBP2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 AIMP2Q13155 320 aaKnown RBP2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 KRT32Q14532 448 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 FAM189A2Q15884 450 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 EXT1Q16394 746 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 C3AR1Q16581 482 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 CA9Q16790 459 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 ISXQ2M1V0 245 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 MS4A18Q3C1V0 323 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 UGT3A2Q3SY77 523 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 SYT14P1Q58G82 188 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 FAM78AQ5JUQ0 283 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 C11orf63Q6NUN7 778 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 FAM198BQ6UWH4 519 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 PCGF5Q86SE9 256 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 CEP57Q86XR8 500 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 LRRC43Q8N309 656 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 SLC37A3Q8NCC5 494 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 KLHL30-AS1Q8NEE0 82 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 OR5T2Q8NGG2 359 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 WDR36Q8NI36 951 aaKnown RBP2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 EVI5LQ96CN4 794 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 SNRNP40Q96DI7 357 aaKnown RBP2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 SAT2Q96F10 170 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 CALML4Q96GE6 196 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 OLFM1Q99784 485 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 P2RY13Q9BPV8 354 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 FTHL17Q9BXU8 183 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 ABCG4Q9H172 646 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 Q9N2K0 584 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 PALMDQ9NP74 551 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 MRPL17Q9NRX2 175 aaKnown RBP2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 SEPT11Q9NVA2 429 aaKnown RBP2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 ARHGEF38Q9NXL2 777 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 STMN3Q9NZ72 180 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 PA2G4Q9UQ80 394 aaKnown RBP2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 HSPG2P98160 4391 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 ITIH6Q6UXX5 1313 aa2.16□□□□□ -2.06
HMGB1P18-201ENST00000438801 TDRD6O60522 2096 aaKnown RBP2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 A0A087WWV3 80 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 ZSCAN5CA6NGD5 496 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 J3KRW8 73 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 CLDN4O14493 209 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 FPGTO14772 594 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 CCL16O15467 120 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 PAPSS1O43252 624 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 EPB41L2O43491 1005 aaKnown RBP2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 TLX2O43763 284 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 GJA1P17302 382 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 CASTP20810 708 aaKnown RBP2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 TNFAIP3P21580 790 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 PAX3P23760 479 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 CD52P31358 61 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 GYG1P46976 350 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 LMAN1P49257 510 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 CSNK1EP49674 416 aaKnown RBP2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 PNLIPRP2P54317 469 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 NAP1L1P55209 391 aaKnown RBP2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 DDX10Q13206 875 aaKnown RBP2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 IRF3Q14653 427 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 KRTAP20-1Q3LI63 56 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 FAM182AQ5T1J6 154 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 KRT79Q5XKE5 535 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 FAAH2Q6GMR7 532 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 TEX38Q6PEX7 206 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 PAMR1Q6UXH9 720 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 RAPH1Q70E73 1250 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 TMPRSS11BQ86T26 416 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 C1orf131Q8NDD1 294 aaKnown RBP2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms