RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 C6P13671 934 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 SMAD2Q15796 467 aaKnown RBP13.17□□□□□ -0.3
LRCH3-206ENST00000438796 PLD6Q8N2A8 252 aaKnown RBP13.17□□□□□ -0.3
LRCH3-206ENST00000438796 ZNF808Q8N4W9 903 aaPredicted RBP13.17□□□□□ -0.3
LRCH3-206ENST00000438796 BBS10Q8TAM1 723 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 IGSF8Q969P0 613 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 FAM124BQ9H5Z6 455 aaPredicted RBP13.17□□□□□ -0.3
LRCH3-206ENST00000438796 IL23AQ9NPF7 189 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 C1GALT1C1LP0DN25 315 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 ABOP16442 354 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 RPS15AP62244 130 aaKnown RBP13.17□□□□□ -0.3
LRCH3-206ENST00000438796 LMAN1LQ9HAT1 526 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 RNF6Q9Y252 685 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 TOXO94900 526 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 PNMTP11086 282 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 KIAA1614Q5VZ46 1190 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 OR2T33Q8NG76 320 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 COPZ2Q9P299 210 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 CAMK2AQ9UQM7 478 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 LRRN3E7EW58 273 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 NFKBIEO00221 500 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 F8A1P23610 371 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 ZXDBP98169 803 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 DHCR24Q15392 516 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 PHC2Q8IXK0 858 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 TEX19Q8NA77 164 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 C2CD4AQ8NCU7 369 aaPredicted RBP13.17□□□□□ -0.3
LRCH3-206ENST00000438796 SLC30A2Q9BRI3 323 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 PAAF1Q9BRP4 392 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 LRRN3Q9H3W5 708 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 LMO7Q8WWI1 1683 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 FRKP42685 505 aaPredicted RBP13.17□□□□□ -0.3
LRCH3-206ENST00000438796 POLR2HP52434 150 aaKnown RBP13.17□□□□□ -0.3
LRCH3-206ENST00000438796 AKR1C2P52895 323 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 TAS2R43P59537 309 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 SIM1P81133 766 aaPredicted RBP13.17□□□□□ -0.3
LRCH3-206ENST00000438796 ZNF630Q2M218 657 aaPredicted RBP13.17□□□□□ -0.3
LRCH3-206ENST00000438796 TOR1AIP2Q8NFQ8 470 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 OARD1Q9Y530 152 aa13.17□□□□□ -0.3
LRCH3-206ENST00000438796 FAM159BA6NKW6 160 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 SRRM3A6NNA2 597 aaPredicted RBP13.16□□□□□ -0.3
LRCH3-206ENST00000438796 HTR3BO95264 441 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 PGCP20142 388 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 APLNRP35414 380 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 RUNX3Q13761 415 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 KLBQ86Z14 1044 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 TMEM130Q8N3G9 435 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 TMEM151AQ8N4L1 468 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 ACTR6Q9GZN1 396 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 C5AR2Q9P296 337 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 CICQ96RK0 1608 aaPredicted RBP13.16□□□□□ -0.3
LRCH3-206ENST00000438796 FAM72CH0Y354 149 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 SNAI1O95863 264 aaPredicted RBP13.16□□□□□ -0.3
LRCH3-206ENST00000438796 IQCF3P0C7M6 154 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 TMEM225BP0DP42 221 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 RNH1P13489 461 aaKnown RBP13.16□□□□□ -0.3
LRCH3-206ENST00000438796 GALNT1Q10472 559 aaPredicted RBP13.16□□□□□ -0.3
LRCH3-206ENST00000438796 PPA1Q15181 289 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 FAM72AQ5TYM5 149 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 CES4AQ5XG92 561 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 FAM72DQ6L9T8 149 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 FAM72BQ86X60 149 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 ZSWIM9Q86XI8 627 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 GID4Q8IVV7 300 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 TRAM1L1Q8N609 369 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 KIAA1191Q96A73 305 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 KATNBL1Q9H079 304 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 VDAC3Q9Y277 283 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 HCN4Q9Y3Q4 1203 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 LCHNA4D1U4 455 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 MAB21L1Q13394 359 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 APOFQ13790 326 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 NADK2Q4G0N4 442 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 NEIL3Q8TAT5 605 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 SECISBP2Q96T21 854 aaKnown RBP13.16□□□□□ -0.3
LRCH3-206ENST00000438796 RGCCQ9H4X1 137 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 SOX17Q9H6I2 414 aaPredicted RBP13.16□□□□□ -0.3
LRCH3-206ENST00000438796 ANKRD34BA5PLL1 514 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 EMC8O43402 210 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 CHRNEQ04844 493 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 KCTD18Q6PI47 426 aaPredicted RBP13.16□□□□□ -0.3
LRCH3-206ENST00000438796 POT1Q9NUX5 634 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 B3GNT2Q9NY97 397 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 MGAT4BQ9UQ53 548 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 EXOSC1Q9Y3B2 195 aaKnown RBP13.16□□□□□ -0.3
LRCH3-206ENST00000438796 DIRAS3O95661 229 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 ZNF28P17035 718 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 GRIA2P42262 883 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 C9orf135Q5VTT2 229 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 LIPJQ5W064 366 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 HAGHLQ6PII5 290 aaPredicted RBP13.16□□□□□ -0.3
LRCH3-206ENST00000438796 LRRN1Q6UXK5 716 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 PIP5K1AQ99755 562 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 ARGFXA6NJG6 315 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 AQP12BA6NM10 295 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 F5H5K5 113 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 RP2O75695 350 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 S100PP25815 95 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 ITGB8P26012 769 aa13.16□□□□□ -0.3
LRCH3-206ENST00000438796 NR4A2P43354 598 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms