RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 CXCR4P61073 352 aa13.15□□□□□ -0.3
PTCHD3-201ENST00000438700 RBBP4Q09028 425 aa13.15□□□□□ -0.3
PTCHD3-201ENST00000438700 CEACAM20Q6UY09 585 aa13.15□□□□□ -0.3
PTCHD3-201ENST00000438700 P3H2Q8IVL5 708 aa13.15□□□□□ -0.3
PTCHD3-201ENST00000438700 FAM20CQ8IXL6 584 aa13.15□□□□□ -0.3
PTCHD3-201ENST00000438700 CDX2Q99626 313 aaPredicted RBP13.15□□□□□ -0.3
PTCHD3-201ENST00000438700 PITX2Q99697 317 aa13.15□□□□□ -0.3
PTCHD3-201ENST00000438700 MS4A8Q9BY19 250 aa13.15□□□□□ -0.3
PTCHD3-201ENST00000438700 GABARAPL3Q9BY60 117 aa13.15□□□□□ -0.3
PTCHD3-201ENST00000438700 OSGIN1Q9UJX0 560 aa13.15□□□□□ -0.3
PTCHD3-201ENST00000438700 IFT52Q9Y366 437 aa13.15□□□□□ -0.3
PTCHD3-201ENST00000438700 SNX11Q9Y5W9 270 aa13.15□□□□□ -0.3
PTCHD3-201ENST00000438700 EFCAB9A8MZ26 197 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 PPM1DO15297 605 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 DPM1O60762 260 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 IL9P15248 144 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 DDCP20711 480 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 AK4P27144 223 aaPredicted RBP13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 AKT2P31751 481 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 ST13P50502 369 aaKnown RBP13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 MANFP55145 182 aaKnown RBP13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 DSTNP60981 165 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 COPZ1P61923 177 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 DUSP7Q16829 419 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 ZNF630Q2M218 657 aaPredicted RBP13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 IKBIPQ70UQ0 350 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 RAB42Q8N4Z0 105 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 CELF2-AS1Q8N7Q2 184 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 UCN3Q969E3 161 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 EXOSC8Q96B26 276 aaKnown RBP13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 MTERF3Q96E29 417 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 NLNQ9BYT8 704 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 DCSTAMPQ9H295 470 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 AHSPQ9NZD4 102 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 DUSP12Q9UNI6 340 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 ANGPT4Q9Y264 503 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 PCDH17O14917 1159 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 OR1F1O43749 312 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 SH3BP5O60239 455 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 KRT75O95678 551 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 BCHEP06276 602 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 ARAFP10398 606 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 DBTP11182 482 aaKnown RBP13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 C21orf33P30042 268 aaPredicted RBP13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 BSGP35613 385 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 CCR8P51685 355 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 NUDT6P53370 316 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 RPE65Q16518 533 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 UBE2UQ5VVX9 321 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 SYT13Q7L8C5 426 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 SZRD1Q7Z422 152 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 NLGN4XQ8N0W4 816 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 ZNF687Q8N1G0 1237 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 HORMAD2Q8N7B1 307 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 UTP15Q8TED0 518 aaKnown RBP13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 GEMIN6Q8WXD5 167 aaKnown RBP13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 RAB8BQ92930 207 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 GTPBP3Q969Y2 492 aaKnown RBP13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 TM4SF18Q96CE8 201 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 TOE1Q96GM8 510 aaKnown RBP13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 ZNF486Q96H40 463 aaPredicted RBP13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 LMAN1LQ9HAT1 526 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 TEX10Q9NXF1 929 aaPredicted RBP13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 TBC1D29Q9UFV1 150 aa13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 SNRNP200O75643 2136 aaKnown RBP13.14□□□□□ -0.31
PTCHD3-201ENST00000438700 TRBC2A0A5B9 178 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 TMPRSS11DO60235 418 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 DNAJB5O75953 348 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 APBB3O95704 486 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 EML2O95834 649 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 IGHV4-34P06331 123 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 UQCRC2P22695 453 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 GRK5P34947 590 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 SLC19A1P41440 591 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 RAB28P51157 221 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 PCBP3P57721 371 aaKnown RBP13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 LEXMQ3ZCV2 418 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 CRB2Q5IJ48 1285 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 CCDC103Q8IW40 242 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 AMER3Q8N944 861 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 TMEM145Q8NBT3 493 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 OR52E1Q8NGJ3 308 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 OR4C15Q8NGM1 316 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 CCL4L1Q8NHW4 92 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 C17orf50Q8WW18 174 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 PROX1Q92786 737 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 TXNDC15Q96J42 360 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 PCBD2Q9H0N5 130 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 LHX9Q9NQ69 397 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 AP1M2Q9Y6Q5 423 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 FAM227AF5H4B4 570 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 AGRPO00253 132 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 CAPN5O15484 640 aaPredicted RBP13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 PDPK1O15530 556 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 LCMT2O60294 686 aaKnown RBP13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 RASGRP1O95267 797 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 IGLV3-19P01714 112 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 PKLRP30613 574 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 GAS6Q14393 721 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 MICAQ29983 383 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms