RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 FBXL16Q8N461 479 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZNF248Q8NDW4 579 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZNF680Q8NEM1 530 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 PROKR2Q8NFJ6 384 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 OR5T1Q8NG75 326 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 OR51L1Q8NGJ5 315 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 OR2AJ1Q8NGZ0 328 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 VANGL1Q8TAA9 524 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 M1APQ8TC57 530 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 SPRYD4Q8WW59 207 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 SEMA4DQ92854 862 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 DAZLQ92904 295 aaKnown RBP3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 MAP4K1Q92918 833 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 CD101Q93033 1021 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 TMEM125Q96AQ2 219 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 TMA16Q96EY4 203 aaKnown RBP3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 DUS3LQ96G46 650 aaKnown RBP3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZFYVE19Q96K21 471 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 LMLNQ96KR4 655 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 HARBI1Q96MB7 349 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 TSNARE1Q96NA8 513 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 GPR78Q96P69 363 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 TEFMQ96QE5 360 aaKnown RBP3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 KRT12Q99456 494 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 CENPKQ9BS16 269 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 C16orf70Q9BSU1 422 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 WACQ9BTA9 647 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 ST6GALNAC5Q9BVH7 336 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 CHID1Q9BWS9 393 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 KRTAP2-2Q9BYT5 123 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 FRMD8Q9BZ67 464 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 TM6SF2Q9BZW4 377 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 DERL2Q9GZP9 239 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 SNX25Q9H3E2 840 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 MTHFD2LQ9H903 347 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 C8orf4Q9NR00 106 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 C20orf96Q9NUD7 363 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 ELOVL2Q9NXB9 296 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 DPP3Q9NY33 737 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 ADA2Q9NZK5 511 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 HSFX1Q9UBD0 423 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 NARFQ9UHQ1 456 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 NOCTQ9UK39 431 aaKnown RBP3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 PSMD13Q9UNM6 376 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 CSDC2Q9Y534 153 aaKnown RBP3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZMYM6O95789 1325 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 POLR3AO14802 1390 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 A0A1B0GVL5 298 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 LOC390937A0A1W2PQ73 354 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 ESYT2A0FGR8 921 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 GOLGA6L4A6NEF3 574 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 E7ENX8 843 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 GOLGA6L19H0YKK7 550 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 H7C1Q1 480 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 TOR1AO14656 332 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 XRCC3O43542 346 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 CYTH3O43739 400 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 CNTN5O94779 1100 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 SYNGR4O95473 234 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 NSA2O95478 260 aaKnown RBP3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 MOCS2O96007 188 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 GSRP00390 522 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 FCER2P06734 321 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 SAGP10523 405 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 ETFAP13804 333 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 WT1P19544 449 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 CYP3A5P20815 502 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 CNR1P21554 472 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 CFL1P23528 166 aaKnown RBP3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 DUSP1P28562 367 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 HNRNPH3P31942 346 aaKnown RBP3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 ARRB2P32121 409 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 OTX1P32242 354 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 SLC8A1P32418 973 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 HMGCLP35914 325 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 HSD17B3P37058 310 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 MMP12P39900 470 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 STAT6P42226 847 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 CSNK1DP48730 415 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 TNFSF10P50591 281 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 PSMD7P51665 324 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 NDST1P52848 882 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 RAB14P61106 215 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 PSMC5P62195 406 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 PAX5Q02548 391 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 STX3Q13277 289 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 SLAMF1Q13291 335 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 VEZF1Q14119 521 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 ITIH4Q14624 930 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 PSG3Q16557 428 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 PTGISQ16647 500 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 C2orf68Q2NKX9 166 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 ARL13AQ5H913 290 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 C6orf226Q5I0X4 101 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 LIPKQ5VXJ0 399 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 ALS2CLQ60I27 953 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 TMEM225Q6GV28 225 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 MFSD12Q6NUT3 480 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 TMEM107Q6UX40 140 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms