RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 ETFBKMTQ8IXQ9 262 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 TAGAPQ8N103 731 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 UBASH3BQ8TF42 649 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 LINC00615Q96LM1 132 aaPredicted RBP9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 ZCCHC2Q9C0B9 1178 aaKnown RBP9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 CRISPLD2Q9H0B8 497 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 MMP27Q9H306 513 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 DPEP2Q9H4A9 486 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 CLEC2DQ9UHP7 191 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 KCND3Q9UK17 655 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 B8ZZF3 427 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 LATO43561 262 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 NOS1APO75052 506 aaPredicted RBP9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 B3GALNT1O75752 331 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 CKMT1AP12532 417 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 ELOAQ14241 798 aaKnown RBP9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 SSX1Q16384 188 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 TSTQ16762 297 aaKnown RBP9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 TPRG1LQ5T0D9 272 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 KHDRBS2Q5VWX1 349 aaKnown RBP9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 SAXO2Q658L1 398 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 OR5D16Q8NGK9 328 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 SPPL3Q8TCT6 385 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 MTERF3Q96E29 417 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 CEP19Q96LK0 163 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 MACROD1Q9BQ69 325 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 MS4A8Q9BY19 250 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 DNAJC27Q9NZQ0 273 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 REV1Q9UBZ9 1251 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 ICKQ9UPZ9 632 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 MRPS23Q9Y3D9 190 aaKnown RBP9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 TRPM6Q9BX84 2022 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 HEPACAM2A8MVW5 462 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 HMGN4O00479 90 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 LCMT2O60294 686 aaKnown RBP9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 TPST2O60704 377 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 OR3A3P47888 321 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 CDC42P60953 191 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 GPLD1P80108 840 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 DEF8Q6ZN54 512 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 C6orf120Q7Z4R8 191 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 ATCAYQ86WG3 371 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 RAD51AP1Q96B01 352 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 ZNF707Q96C28 371 aaPredicted RBP9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 OTUB2Q96DC9 234 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 NEURL3Q96EH8 262 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 MGLLQ99685 303 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 MENTQ9BUN1 341 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 MAU2Q9Y6X3 613 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 C17orf113A0A1B0GUU1 675 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 A8MUA0 341 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 ARHGAP33O14559 1287 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 KCNK2O95069 426 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 ENPP1P22413 925 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 RPL3P39023 403 aaKnown RBP9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 IL12RB1P42701 662 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 ZNF234Q14588 700 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 SYPL1Q16563 259 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 FAM205BPQ63HN1 556 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 LCTLQ6UWM7 567 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 PDZD3Q86UT5 571 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 PARP16Q8N5Y8 322 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 SNAPC3Q92966 411 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 SLC6A18Q96N87 628 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 NXF2Q9GZY0 626 aaKnown RBP9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 DSPPQ9NZW4 1301 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 MYO10Q9HD67 2058 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 ANHXE9PGG2 379 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 RFXAPO00287 272 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 KIAA0513O60268 411 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 IFNA14P01570 189 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 ALPPL2P10696 532 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 ELAVL4P26378 380 aaKnown RBP9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 COL4A3Q01955 1670 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 DPTQ07507 201 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 TBRG1Q3YBR2 411 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 ZNF544Q6NX49 715 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 PAQR6Q6TCH4 344 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 UNC5DQ6UXZ4 953 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 SZRD1Q7Z422 152 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 UBE3DQ7Z6J8 389 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 C17orf64Q86WR6 236 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 WDR36Q8NI36 951 aaKnown RBP9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 OR8D1Q8WZ84 308 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 NECTIN4Q96NY8 510 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 AICDAQ9GZX7 198 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 MVB12BQ9H7P6 319 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 ATG2BQ96BY7 2078 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 A0A1W2PPV9 198 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 CARNS1A5YM72 827 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 A8MVJ9 347 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 ATP6V1G2-DDX39BF2Z307 99 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 CTDSP2O14595 271 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 SCO2O43819 266 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 GPX5O75715 221 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 PCCBP05166 539 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 HOXB3P14651 431 aaPredicted RBP9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 SOX3P41225 446 aa9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 SNRPD2P62316 118 aaKnown RBP9.86□□□□□ -0.83
CLSTN1-203ENST00000435891 CD83Q01151 205 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms