RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 TOR4AQ9NXH8 423 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 ACTR3BQ9P1U1 418 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 MAU2Q9Y6X3 613 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 A0A1W2PS29 197 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 LDB3O75112 727 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 ENTPD5O75356 428 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 SLITRK5O94991 958 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 ATP1B1P05026 303 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 IFI6P09912 130 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 CDK4P11802 303 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 XCR1P46094 333 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 OR1D4P47884 311 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 CCT3P49368 545 aaKnown RBP17.11■□□□□ 0.33
HMGN1-206ENST00000431390 MVDP53602 400 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 HSD17B7P56937 341 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 OR4D2P58180 307 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 IGLV3-21P80748 117 aaPredicted RBP17.11■□□□□ 0.33
HMGN1-206ENST00000431390 RGNQ15493 299 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 SPDYE7PQ495Y7 208 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.11■□□□□ 0.33
HMGN1-206ENST00000431390 CDCP2Q5VXM1 449 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 CPZQ66K79 652 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 PWWP2BQ6NUJ5 590 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 DHFR2Q86XF0 187 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 OR4N5Q8IXE1 308 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 CLEC4FQ8N1N0 589 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 OR5AK3PQ8NH89 298 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 COL26A1Q96A83 441 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 CMKLR1Q99788 373 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 STRADBQ9C0K7 418 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 CHST8Q9H2A9 424 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 PRTFDC1Q9NRG1 225 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 MAGEL2Q9UJ55 1249 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 SNX13Q9Y5W8 968 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 FER1L5A0AVI2 2057 aa17.1■□□□□ 0.33
HMGN1-206ENST00000431390 ELOVL7A1L3X0 281 aa17.1■□□□□ 0.33
HMGN1-206ENST00000431390 POLR1CO15160 346 aaPredicted RBP17.1■□□□□ 0.33
HMGN1-206ENST00000431390 TIAF1O95411 115 aa17.1■□□□□ 0.33
HMGN1-206ENST00000431390 C1QCP02747 245 aa17.1■□□□□ 0.33
HMGN1-206ENST00000431390 NTRK1P04629 796 aa17.1■□□□□ 0.33
HMGN1-206ENST00000431390 MAGEA8P43361 318 aa17.1■□□□□ 0.33
HMGN1-206ENST00000431390 BIKQ13323 160 aa17.1■□□□□ 0.33
HMGN1-206ENST00000431390 CCNIQ14094 377 aa17.1■□□□□ 0.33
HMGN1-206ENST00000431390 LCN8Q6JVE9 175 aa17.1■□□□□ 0.33
HMGN1-206ENST00000431390 ERICH5Q6P6B1 374 aa17.1■□□□□ 0.33
HMGN1-206ENST00000431390 BHLHB9Q6PI77 547 aa17.1■□□□□ 0.33
HMGN1-206ENST00000431390 TMPRSS7Q7RTY8 843 aa17.1■□□□□ 0.33
HMGN1-206ENST00000431390 C10orf67Q8IYJ2 551 aa17.1■□□□□ 0.33
HMGN1-206ENST00000431390 C10orf111Q8N326 155 aa17.1■□□□□ 0.33
HMGN1-206ENST00000431390 C7orf57Q8NEG2 295 aa17.1■□□□□ 0.33
HMGN1-206ENST00000431390 OR9A2Q8NGT5 310 aa17.1■□□□□ 0.33
HMGN1-206ENST00000431390 PNPT1Q8TCS8 783 aaKnown RBP17.1■□□□□ 0.33
HMGN1-206ENST00000431390 RBCK1Q9BYM8 510 aa17.1■□□□□ 0.33
HMGN1-206ENST00000431390 TRIM15Q9C019 465 aa17.1■□□□□ 0.33
HMGN1-206ENST00000431390 PIF1Q9H611 641 aa17.1■□□□□ 0.33
HMGN1-206ENST00000431390 GPATCH2Q9NW75 528 aa17.1■□□□□ 0.33
HMGN1-206ENST00000431390 EGFL7Q9UHF1 273 aa17.1■□□□□ 0.33
HMGN1-206ENST00000431390 ACSL6Q9UKU0 697 aa17.1■□□□□ 0.33
HMGN1-206ENST00000431390 MMACHCQ9Y4U1 282 aa17.1■□□□□ 0.33
HMGN1-206ENST00000431390 B4E171 279 aa17.09■□□□□ 0.33
HMGN1-206ENST00000431390 PLOD2O00469 737 aa17.09■□□□□ 0.33
HMGN1-206ENST00000431390 ARPC2O15144 300 aa17.09■□□□□ 0.33
HMGN1-206ENST00000431390 ONECUT2O95948 504 aa17.09■□□□□ 0.33
HMGN1-206ENST00000431390 SLC35E2P0CK97 266 aa17.09■□□□□ 0.33
HMGN1-206ENST00000431390 TSPAN7P41732 249 aa17.09■□□□□ 0.33
HMGN1-206ENST00000431390 SLC13A2Q13183 592 aa17.09■□□□□ 0.33
HMGN1-206ENST00000431390 CYP51A1Q16850 503 aa17.09■□□□□ 0.33
HMGN1-206ENST00000431390 ARHGAP40Q5TG30 622 aa17.09■□□□□ 0.33
HMGN1-206ENST00000431390 ANGPTL8Q6UXH0 198 aa17.09■□□□□ 0.33
HMGN1-206ENST00000431390 MICU2Q8IYU8 434 aa17.09■□□□□ 0.33
HMGN1-206ENST00000431390 BHLHE22Q8NFJ8 381 aaPredicted RBP17.09■□□□□ 0.33
HMGN1-206ENST00000431390 OR56A1Q8NGH5 318 aa17.09■□□□□ 0.33
HMGN1-206ENST00000431390 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.09■□□□□ 0.33
HMGN1-206ENST00000431390 CLIP3Q96DZ5 547 aa17.09■□□□□ 0.33
HMGN1-206ENST00000431390 ELP4Q96EB1 424 aa17.09■□□□□ 0.33
HMGN1-206ENST00000431390 C3orf14Q9HBI5 128 aa17.09■□□□□ 0.33
HMGN1-206ENST00000431390 APMAPQ9HDC9 416 aa17.09■□□□□ 0.33
HMGN1-206ENST00000431390 MKKSQ9NPJ1 570 aaPredicted RBP17.09■□□□□ 0.33
HMGN1-206ENST00000431390 LANCL2Q9NS86 450 aa17.09■□□□□ 0.33
HMGN1-206ENST00000431390 ZCCHC3Q9NUD5 404 aaKnown RBP17.09■□□□□ 0.33
HMGN1-206ENST00000431390 TRPC4Q9UBN4 977 aa17.09■□□□□ 0.33
HMGN1-206ENST00000431390 USP22Q9UPT9 525 aa17.09■□□□□ 0.33
HMGN1-206ENST00000431390 URB1O60287 2271 aaKnown RBP17.09■□□□□ 0.33
HMGN1-206ENST00000431390 IGSF10Q6WRI0 2623 aa17.08■□□□□ 0.33
HMGN1-206ENST00000431390 AGRPO00253 132 aa17.08■□□□□ 0.32
HMGN1-206ENST00000431390 EMC8O43402 210 aa17.08■□□□□ 0.32
HMGN1-206ENST00000431390 B4GALT2O60909 372 aa17.08■□□□□ 0.32
HMGN1-206ENST00000431390 BMP10O95393 424 aa17.08■□□□□ 0.32
HMGN1-206ENST00000431390 BMP2P12643 396 aa17.08■□□□□ 0.32
HMGN1-206ENST00000431390 GGT1P19440 569 aa17.08■□□□□ 0.32
HMGN1-206ENST00000431390 PRR5P85299 388 aa17.08■□□□□ 0.32
HMGN1-206ENST00000431390 ID2Q02363 134 aa17.08■□□□□ 0.32
HMGN1-206ENST00000431390 CCDC157Q569K6 752 aa17.08■□□□□ 0.32
HMGN1-206ENST00000431390 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.08■□□□□ 0.32
HMGN1-206ENST00000431390 C1orf189Q5VU69 101 aa17.08■□□□□ 0.32
HMGN1-206ENST00000431390 TMEM107Q6UX40 140 aa17.08■□□□□ 0.32
HMGN1-206ENST00000431390 C6orf120Q7Z4R8 191 aa17.08■□□□□ 0.32
HMGN1-206ENST00000431390 RNF130Q86XS8 419 aa17.08■□□□□ 0.32
HMGN1-206ENST00000431390 ZNF675Q8TD23 568 aa17.08■□□□□ 0.32
HMGN1-206ENST00000431390 STMN2Q93045 179 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms