RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 SPRED3Q2MJR0 410 aa16.75■□□□□ 0.27
UPK3BP1-201ENST00000428678 DEPDC1Q5TB30 811 aa16.75■□□□□ 0.27
UPK3BP1-201ENST00000428678 SYDE1Q6ZW31 735 aaPredicted RBP16.75■□□□□ 0.27
UPK3BP1-201ENST00000428678 LRRC70Q7Z2Q7 622 aa16.75■□□□□ 0.27
UPK3BP1-201ENST00000428678 KRTAP1-3Q8IUG1 177 aa16.75■□□□□ 0.27
UPK3BP1-201ENST00000428678 LAS2Q8IYD9 372 aa16.75■□□□□ 0.27
UPK3BP1-201ENST00000428678 RNF175Q8N4F7 328 aa16.75■□□□□ 0.27
UPK3BP1-201ENST00000428678 OR7G3Q8NG95 312 aa16.75■□□□□ 0.27
UPK3BP1-201ENST00000428678 RIT1Q92963 219 aa16.75■□□□□ 0.27
UPK3BP1-201ENST00000428678 RGMAQ96B86 450 aa16.75■□□□□ 0.27
UPK3BP1-201ENST00000428678 TSPAN17Q96FV3 270 aa16.75■□□□□ 0.27
UPK3BP1-201ENST00000428678 GNRHR2Q96P88 292 aa16.75■□□□□ 0.27
UPK3BP1-201ENST00000428678 CENPKQ9BS16 269 aa16.75■□□□□ 0.27
UPK3BP1-201ENST00000428678 CD244Q9BZW8 370 aa16.75■□□□□ 0.27
UPK3BP1-201ENST00000428678 UBQLN3Q9H347 655 aa16.75■□□□□ 0.27
UPK3BP1-201ENST00000428678 RYDENQ9NUL5 291 aaKnown RBP16.75■□□□□ 0.27
UPK3BP1-201ENST00000428678 C15orf41Q9Y2V0 281 aa16.75■□□□□ 0.27
UPK3BP1-201ENST00000428678 ATRQ13535 2644 aa16.75■□□□□ 0.27
UPK3BP1-201ENST00000428678 C2orf92A0A1B0GVN3 265 aa16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 MBD3L4A6NDZ8 208 aaPredicted RBP16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 MBD3L3A6NE82 208 aaPredicted RBP16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 MBD3L5A6NJ08 208 aaPredicted RBP16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 GLOD5A6NK44 160 aa16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 SNX4O95219 450 aa16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 WISP3O95389 354 aaPredicted RBP16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 GPR75O95800 540 aa16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 HRGP04196 525 aa16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 HEXAP06865 529 aa16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 TMIGD3P0DMS9 266 aaPredicted RBP16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 BMP7P18075 431 aa16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 BUD31P41223 144 aaPredicted RBP16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 EIPR1Q53HC9 387 aa16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 DCST1Q5T197 706 aa16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 SHEQ5VZ18 495 aa16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 CAPN12Q6ZSI9 719 aa16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 PACS2Q86VP3 889 aa16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 VWA5B2Q8N398 1253 aa16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 MBD3L2Q8NHZ7 208 aaPredicted RBP16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 ABTB1Q969K4 478 aaPredicted RBP16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 ARSGQ96EG1 525 aa16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 WDYHV1Q96HA8 205 aa16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 MCMBPQ9BTE3 642 aa16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 RBM24Q9BX46 236 aaKnown RBP16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 UGT2B28Q9BY64 529 aa16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 SNX15Q9NRS6 342 aa16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 TEX10Q9NXF1 929 aaPredicted RBP16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 IKBKGQ9Y6K9 419 aa16.74■□□□□ 0.27
UPK3BP1-201ENST00000428678 WASHC1A8K0Z3 465 aa16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 FAM171A2A8MVW0 826 aa16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 PLPP1O14494 284 aa16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 ERN1O75460 977 aaKnown RBP16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 IL18BPO95998 194 aa16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 TMED10P49755 219 aaKnown RBP16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 ILF2Q12905 390 aaKnown RBP16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 RCAN2Q14206 197 aa16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 E2F2Q14209 437 aa16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 NHSL2Q5HYW2 709 aa16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 WIPI1Q5MNZ9 446 aaPredicted RBP16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 FNDC7Q5VTL7 733 aa16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 HLA-DQA1Q5Y7H0 255 aa16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 SLC35F6Q8N357 371 aa16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 ZNF441Q8N8Z8 693 aa16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 C9orf106Q8NAJ2 232 aa16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 HUS1BQ8NHY5 278 aa16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 SPPL2AQ8TCT8 520 aa16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 NUDT8Q8WV74 236 aa16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 DACH2Q96NX9 599 aa16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 ANGPTL4Q9BY76 406 aa16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 CALHM2Q9HA72 323 aa16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 SMYD2Q9NRG4 433 aa16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 JKAMPQ9P055 326 aa16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 TXNDC16Q9P2K2 825 aa16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 SNX12Q9UMY4 172 aa16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 NPFFR2Q9Y5X5 522 aa16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 EXPH5Q8NEV8 1989 aa16.73■□□□□ 0.27
UPK3BP1-201ENST00000428678 A0A1W2PPR1 153 aa16.72■□□□□ 0.27
UPK3BP1-201ENST00000428678 SH3D21A4FU49 640 aa16.72■□□□□ 0.27
UPK3BP1-201ENST00000428678 ARHGEF9O43307 516 aa16.72■□□□□ 0.27
UPK3BP1-201ENST00000428678 CLPSP04118 112 aa16.72■□□□□ 0.27
UPK3BP1-201ENST00000428678 NR2F6P10588 404 aa16.72■□□□□ 0.27
UPK3BP1-201ENST00000428678 STMN1P16949 149 aa16.72■□□□□ 0.27
UPK3BP1-201ENST00000428678 SSTR4P31391 388 aa16.72■□□□□ 0.27
UPK3BP1-201ENST00000428678 CPA2P48052 419 aa16.72■□□□□ 0.27
UPK3BP1-201ENST00000428678 RPP38P78345 283 aaKnown RBP16.72■□□□□ 0.27
UPK3BP1-201ENST00000428678 GRHL2Q6ISB3 625 aa16.72■□□□□ 0.27
UPK3BP1-201ENST00000428678 LUZP2Q86TE4 346 aa16.72■□□□□ 0.27
UPK3BP1-201ENST00000428678 MYLK4Q86YV6 388 aaPredicted RBP16.72■□□□□ 0.27
UPK3BP1-201ENST00000428678 KLHL7Q8IXQ5 586 aa16.72■□□□□ 0.27
UPK3BP1-201ENST00000428678 PRR22Q8IZ63 422 aa16.72■□□□□ 0.27
UPK3BP1-201ENST00000428678 ZCCHC7Q8N3Z6 543 aaKnown RBP16.72■□□□□ 0.27
UPK3BP1-201ENST00000428678 TP53INP1Q96A56 240 aa16.72■□□□□ 0.27
UPK3BP1-201ENST00000428678 SECISBP2Q96T21 854 aaKnown RBP16.72■□□□□ 0.27
UPK3BP1-201ENST00000428678 MTERF1Q99551 399 aaKnown RBP16.72■□□□□ 0.27
UPK3BP1-201ENST00000428678 ALG9Q9H6U8 611 aa16.72■□□□□ 0.27
UPK3BP1-201ENST00000428678 GALNT8Q9NY28 637 aa16.72■□□□□ 0.27
UPK3BP1-201ENST00000428678 OPTCQ9UBM4 332 aa16.72■□□□□ 0.27
UPK3BP1-201ENST00000428678 ADGRE2Q9UHX3 823 aa16.72■□□□□ 0.27
UPK3BP1-201ENST00000428678 STAB1Q9NY15 2570 aa16.71■□□□□ 0.27
UPK3BP1-201ENST00000428678 SUPT3HB4E1H0 165 aa16.71■□□□□ 0.27
UPK3BP1-201ENST00000428678 CES2O00748 559 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms