RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 HMCESQ96FZ2 354 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 LCORQ96JN0 433 aaPredicted RBP15.29■□□□□ 0.04
C9orf3-206ENST00000428313 DDOQ99489 341 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 OSGEPL1Q9H4B0 414 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 MYOZ2Q9NPC6 264 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 REV1Q9UBZ9 1251 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 GPN3Q9UHW5 284 aaPredicted RBP15.29■□□□□ 0.04
C9orf3-206ENST00000428313 GPR160Q9UJ42 338 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 CBLCQ9ULV8 474 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 DHRS7Q9Y394 339 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 PRAMEF25A6NGN4 478 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 MOXD2PA6NHM9 499 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 ARIH2O95376 493 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 PDYNP01213 254 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 SELENOPP49908 381 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 SSTP61278 116 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 RGNQ15493 299 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 USP50Q70EL3 339 aaPredicted RBP15.28■□□□□ 0.04
C9orf3-206ENST00000428313 OR1M1Q8NGA1 313 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 OR56B4Q8NH76 319 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 CSGALNACT1Q8TDX6 532 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 YIPF4Q9BSR8 244 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 ZSCAN32Q9NX65 697 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 PTCH2Q9Y6C5 1203 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 NUP214P35658 2090 aaPredicted RBP15.28■□□□□ 0.04
C9orf3-206ENST00000428313 ANKDD1BA6NHY2 528 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 HEPACAM2A8MVW5 462 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 NCR1O76036 304 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 TOXO94900 526 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 RASGRP1O95267 797 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 CPSF4O95639 269 aaKnown RBP15.28■□□□□ 0.04
C9orf3-206ENST00000428313 PIRTP0C851 137 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 OR1E2P47887 323 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 PITPNBP48739 271 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 KIAA1024LP59773 190 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 SLC36A2Q495M3 483 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 TMPRSS9Q7Z410 1059 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 SULF1Q8IWU6 871 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 FAM26EQ8N5C1 309 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 ARIH2OSQ8N7S6 290 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 DBF4BQ8NFT6 615 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 OR4K2Q8NGD2 314 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 OR1S1Q8NH92 325 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 EMID1Q96A84 441 aaPredicted RBP15.28■□□□□ 0.04
C9orf3-206ENST00000428313 TRIB3Q96RU7 358 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 SEMA3CQ99985 751 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 CACNG6Q9BXT2 260 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 POLR1EQ9GZS1 481 aaKnown RBP15.28■□□□□ 0.04
C9orf3-206ENST00000428313 SPRTNQ9H040 489 aaPredicted RBP15.28■□□□□ 0.04
C9orf3-206ENST00000428313 WWOXQ9NZC7 414 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 FLRT1Q9NZU1 646 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 TMEM5Q9Y2B1 443 aa15.28■□□□□ 0.04
C9orf3-206ENST00000428313 A0A1B0GW55 424 aa15.27■□□□□ 0.04
C9orf3-206ENST00000428313 EEF1E1O43324 174 aaKnown RBP15.27■□□□□ 0.04
C9orf3-206ENST00000428313 CLDN9O95484 217 aa15.27■□□□□ 0.04
C9orf3-206ENST00000428313 ECDO95905 644 aaPredicted RBP15.27■□□□□ 0.04
C9orf3-206ENST00000428313 HLA-DPB1P04440 258 aa15.27■□□□□ 0.04
C9orf3-206ENST00000428313 THP07101 528 aa15.27■□□□□ 0.04
C9orf3-206ENST00000428313 DUX4L2P0CJ85 424 aa15.27■□□□□ 0.04
C9orf3-206ENST00000428313 DUX4L3P0CJ86 424 aa15.27■□□□□ 0.04
C9orf3-206ENST00000428313 DUX4L4P0CJ87 422 aa15.27■□□□□ 0.04
C9orf3-206ENST00000428313 DUX4L5P0CJ88 424 aa15.27■□□□□ 0.04
C9orf3-206ENST00000428313 DUX4L6P0CJ89 424 aa15.27■□□□□ 0.04
C9orf3-206ENST00000428313 DUX4L7P0CJ90 424 aa15.27■□□□□ 0.04
C9orf3-206ENST00000428313 EPB42P16452 691 aa15.27■□□□□ 0.04
C9orf3-206ENST00000428313 ACSL1P33121 698 aa15.27■□□□□ 0.04
C9orf3-206ENST00000428313 MAZP56270 477 aaKnown RBP15.27■□□□□ 0.04
C9orf3-206ENST00000428313 LILRA4P59901 499 aa15.27■□□□□ 0.04
C9orf3-206ENST00000428313 MACC1Q6ZN28 852 aa15.27■□□□□ 0.04
C9orf3-206ENST00000428313 OR6S1Q8NH40 331 aa15.27■□□□□ 0.04
C9orf3-206ENST00000428313 NEIL3Q8TAT5 605 aa15.27■□□□□ 0.04
C9orf3-206ENST00000428313 MAL2Q969L2 176 aa15.27■□□□□ 0.04
C9orf3-206ENST00000428313 ARL5BQ96KC2 179 aa15.27■□□□□ 0.04
C9orf3-206ENST00000428313 SPATA33Q96N06 139 aa15.27■□□□□ 0.04
C9orf3-206ENST00000428313 COPS8Q99627 209 aa15.27■□□□□ 0.04
C9orf3-206ENST00000428313 TREX2Q9BQ50 279 aaPredicted RBP15.27■□□□□ 0.04
C9orf3-206ENST00000428313 TCF25Q9BQ70 676 aa15.27■□□□□ 0.04
C9orf3-206ENST00000428313 SARS2Q9NP81 518 aaKnown RBP15.27■□□□□ 0.04
C9orf3-206ENST00000428313 FGF20Q9NP95 211 aaPredicted RBP15.27■□□□□ 0.04
C9orf3-206ENST00000428313 TMEM30AQ9NV96 361 aa15.27■□□□□ 0.04
C9orf3-206ENST00000428313 DUX4Q9UBX2 424 aa15.27■□□□□ 0.04
C9orf3-206ENST00000428313 PRKAG2Q9UGJ0 569 aa15.27■□□□□ 0.04
C9orf3-206ENST00000428313 ENPP4Q9Y6X5 453 aa15.27■□□□□ 0.04
C9orf3-206ENST00000428313 COL4A5P29400 1685 aa15.27■□□□□ 0.03
C9orf3-206ENST00000428313 C1orf226A1L170 272 aa15.27■□□□□ 0.03
C9orf3-206ENST00000428313 J3KTA2 159 aa15.27■□□□□ 0.03
C9orf3-206ENST00000428313 ZNF593O00488 134 aaPredicted RBP15.27■□□□□ 0.03
C9orf3-206ENST00000428313 RP2O75695 350 aa15.27■□□□□ 0.03
C9orf3-206ENST00000428313 RECQL4O94761 1208 aa15.27■□□□□ 0.03
C9orf3-206ENST00000428313 ALDOBP05062 364 aa15.27■□□□□ 0.03
C9orf3-206ENST00000428313 INSRRP14616 1297 aa15.27■□□□□ 0.03
C9orf3-206ENST00000428313 JUPP14923 745 aa15.27■□□□□ 0.03
C9orf3-206ENST00000428313 POU3F2P20265 443 aaPredicted RBP15.27■□□□□ 0.03
C9orf3-206ENST00000428313 CENPAP49450 140 aa15.27■□□□□ 0.03
C9orf3-206ENST00000428313 CDKN1CP49918 316 aaPredicted RBP15.27■□□□□ 0.03
C9orf3-206ENST00000428313 C21orf58P58505 322 aa15.27■□□□□ 0.03
C9orf3-206ENST00000428313 TAF1AQ15573 450 aaPredicted RBP15.27■□□□□ 0.03
C9orf3-206ENST00000428313 MICBQ29980 383 aa15.27■□□□□ 0.03
C9orf3-206ENST00000428313 MPPE1Q53F39 396 aa15.27■□□□□ 0.03
C9orf3-206ENST00000428313 LYPD4Q6UWN0 246 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms